Analysis of interatomic Contacts of Structural Units in PDB entry:
2G2M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2G2M entry

There is 1 chain in PDB entry 2G2M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1ILE 350
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 2G2M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1 11Right-handed alpha
Helix 2
2
A
23 38Right-handed alpha
Helix 3
3
A
54 63Right-handed alpha
Helix 4
4
A
70 75Right-handed alpha
Helix 5
5
A
90 105Right-handed alpha
Helix 6
6
A
116 131Right-handed alpha
Helix 7
7
A
144 150Right-handed alpha
Helix 8
8
A
184 196Right-handed alpha
Helix 9
9
A
203 212Right-handed alpha
Helix 10
10
A
218 229Right-handed alpha
Helix 11
11
A
232 242Right-handed alpha
Helix 12
12
A
252 256Right-handed 310
Helix 13
13
A
261 274Right-handed alpha
Helix 14
14
A
279 286Right-handed alpha
Helix 15
15
A
287 289Right-handed 310
Helix 16
16
A
297 304Right-handed alpha
Helix 17
17
A
308 320Right-handed alpha
Helix 18
18
A
337 348Right-handed alpha
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There are 2 sheets in PDB entry 2G2M. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 85first strand
Strand 2
A
136 142parallel
Strand 3
A
157 162parallel
Strand 4
A
43 48parallel
Strand 5
A
173 178parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
295 296first strand
Strand 2
A
331 335anti-parallel
Strand 3
A
324 328anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il