Analysis of interatomic Contacts of Structural Units in PDB entry:
2G4J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2G4J entry

There is 1 chain in PDB entry 2G4J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 1ARG 386
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 2G4J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 8Right-handed 310
Helix 2
2
A
14 18Right-handed alpha
Helix 3
3
A
34 46Right-handed alpha
Helix 4
4
A
54 58Right-handed alpha
Helix 5
5
A
63 82Right-handed alpha
Helix 6
6
A
95 99Right-handed 310
Helix 7
7
A
107 128Right-handed alpha
Helix 8
8
A
149 172Right-handed alpha
Helix 9
9
A
194 203Right-handed alpha
Helix 10
10
A
207 209Right-handed 310
Helix 11
11
A
216 222Right-handed alpha
Helix 12
12
A
226 237Right-handed alpha
Helix 13
13
A
263 278Right-handed alpha
Helix 14
14
A
294 322Right-handed alpha
Helix 15
15
A
322 332Right-handed alpha
Helix 16
16
A
333 338Right-handed alpha
Helix 17
17
A
345 351Right-handed alpha
Helix 18
18
A
352 356Right-handed 310
Helix 19
19
A
360 367Right-handed alpha
Helix 20
20
A
370 384Right-handed alpha
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There are 2 sheets in PDB entry 2G4J. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 213first strand
Strand 2
A
176 179parallel
Strand 3
A
132 135parallel
Strand 4
A
87 89parallel
Strand 5
A
49 53parallel
Strand 6
A
10 13parallel
Strand 7
A
283 285parallel
Strand 8
A
244 245parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 142first strand
Strand 2
A
189 190anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il