Analysis of interatomic Contacts of Structural Units in PDB entry:
2G5B

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2G5B entry

There are 12 chains in PDB entry 2G5B (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 1	ASN 211
B	GLU 1	PRO 210
C	ASP 1	ASN 211
D	GLU 1	PRO 210
E	ASP 1	ASN 211
F	GLU 1	PRO 210
G	ASP 1	ASN 211
H	GLU 1	PRO 210
I	PRO 601	ILE 607
J	PRO 601	ILE 607
K	PRO 601	ILE 607
L	PRO 601	ILE 607

There are 44 helices in PDB entry 2G5B. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	79	83	Right-handed 310
Helix 2	2	A	120	126	Right-handed alpha
Helix 3	3	A	182	187	Right-handed alpha
Helix 4	4	B	28	32	Right-handed 310
Helix 5	5	B	52	52	Right-handed 310
Helix 6	6	B	83	87	Right-handed 310
Helix 7	7	B	97	100	Right-handed 310
Helix 8	8	B	154	156	Right-handed 310
Helix 9	9	B	184	186	Right-handed 310
Helix 10	10	B	198	201	Right-handed 310
Helix 11	11	C	79	83	Right-handed 310
Helix 12	12	C	120	126	Right-handed alpha
Helix 13	13	C	182	187	Right-handed alpha
Helix 14	14	D	28	32	Right-handed 310
Helix 15	15	D	52	52	Right-handed 310
Helix 16	16	D	83	87	Right-handed 310
Helix 17	17	D	97	100	Right-handed 310
Helix 18	18	D	154	156	Right-handed 310
Helix 19	19	D	184	186	Right-handed 310
Helix 20	20	D	198	201	Right-handed 310
Helix 21	21	E	79	83	Right-handed 310
Helix 22	22	E	120	126	Right-handed alpha
Helix 23	23	E	182	187	Right-handed alpha
Helix 24	24	F	28	32	Right-handed 310
Helix 25	25	F	52	52	Right-handed 310
Helix 26	26	F	59	62	Right-handed 310
Helix 27	27	F	83	87	Right-handed 310
Helix 28	28	F	97	100	Right-handed 310
Helix 29	29	F	184	186	Right-handed 310
Helix 30	30	F	198	201	Right-handed 310
Helix 31	31	G	79	83	Right-handed 310
Helix 32	32	G	120	126	Right-handed alpha
Helix 33	33	G	182	187	Right-handed alpha
Helix 34	34	H	28	32	Right-handed 310
Helix 35	35	H	52	52	Right-handed 310
Helix 36	36	H	83	87	Right-handed 310
Helix 37	37	H	97	100	Right-handed 310
Helix 38	38	H	154	156	Right-handed 310
Helix 39	39	H	184	186	Right-handed 310
Helix 40	40	H	198	201	Right-handed 310
Helix 41	41	I	601	605	Right-handed 310
Helix 42	42	J	601	605	Right-handed 310
Helix 43	43	K	601	605	Right-handed 310
Helix 44	44	L	601	605	Right-handed 310

There are 48 sheets in PDB entry 2G5B. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP, AQ, AR, AS, AT, AU, AV,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4	7	first strand
Strand 2	A	19	25	anti-parallel
Strand 3	A	70	75	anti-parallel
Strand 4	A	62	67	anti-parallel

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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	10	13	first strand
Strand 2	A	101	105	parallel
Strand 3	A	84	90	anti-parallel
Strand 4	A	33	38	anti-parallel
Strand 5	A	45	49	anti-parallel
Strand 6	A	53	54	anti-parallel

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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	10	13	first strand
Strand 2	A	101	105	parallel
Strand 3	A	84	90	anti-parallel
Strand 4	A	96	97	anti-parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	30	30	first strand
Strand 2	A	30	31	anti-parallel

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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	113	117	first strand
Strand 2	A	128	138	anti-parallel
Strand 3	A	172	181	anti-parallel
Strand 4	A	158	162	anti-parallel

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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	152	154	first strand
Strand 2	A	144	149	anti-parallel
Strand 3	A	190	196	anti-parallel
Strand 4	A	204	209	anti-parallel

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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3	7	first strand
Strand 2	B	18	25	anti-parallel
Strand 3	B	75	80	anti-parallel
Strand 4	B	65	70	anti-parallel

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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	11	12	first strand
Strand 2	B	105	109	parallel
Strand 3	B	88	96	anti-parallel
Strand 4	B	33	39	anti-parallel
Strand 5	B	46	51	anti-parallel
Strand 6	B	55	57	anti-parallel

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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	11	12	first strand
Strand 2	B	105	109	parallel
Strand 3	B	88	96	anti-parallel
Strand 4	B	100	101	anti-parallel

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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	118	122	first strand
Strand 2	B	133	143	anti-parallel
Strand 3	B	173	182	anti-parallel
Strand 4	B	161	163	anti-parallel

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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	118	122	first strand
Strand 2	B	133	143	anti-parallel
Strand 3	B	173	182	anti-parallel
Strand 4	B	167	168	anti-parallel

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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	149	152	first strand
Strand 2	B	192	197	anti-parallel
Strand 3	B	202	207	anti-parallel

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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	4	7	first strand
Strand 2	C	19	25	anti-parallel
Strand 3	C	70	75	anti-parallel
Strand 4	C	62	67	anti-parallel

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There are 6 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	10	13	first strand
Strand 2	C	101	105	parallel
Strand 3	C	84	90	anti-parallel
Strand 4	C	33	38	anti-parallel
Strand 5	C	45	49	anti-parallel
Strand 6	C	53	54	anti-parallel

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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	10	13	first strand
Strand 2	C	101	105	parallel
Strand 3	C	84	90	anti-parallel
Strand 4	C	96	97	anti-parallel

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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	30	30	first strand
Strand 2	C	30	31	anti-parallel

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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	113	117	first strand
Strand 2	C	128	138	anti-parallel
Strand 3	C	172	181	anti-parallel
Strand 4	C	158	162	anti-parallel

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There are 4 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	152	154	first strand
Strand 2	C	144	149	anti-parallel
Strand 3	C	190	196	anti-parallel
Strand 4	C	204	209	anti-parallel

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There are 4 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	7	first strand
Strand 2	D	18	25	anti-parallel
Strand 3	D	75	80	anti-parallel
Strand 4	D	65	69	anti-parallel

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There are 6 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	11	12	first strand
Strand 2	D	105	109	parallel
Strand 3	D	88	96	anti-parallel
Strand 4	D	33	39	anti-parallel
Strand 5	D	46	51	anti-parallel
Strand 6	D	55	57	anti-parallel

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There are 4 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	11	12	first strand
Strand 2	D	105	109	parallel
Strand 3	D	88	96	anti-parallel
Strand 4	D	100	101	anti-parallel

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There are 4 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	118	122	first strand
Strand 2	D	133	143	anti-parallel
Strand 3	D	173	182	anti-parallel
Strand 4	D	161	163	anti-parallel

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There are 4 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	118	122	first strand
Strand 2	D	133	143	anti-parallel
Strand 3	D	173	182	anti-parallel
Strand 4	D	167	168	anti-parallel

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There are 3 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	149	152	first strand
Strand 2	D	192	197	anti-parallel
Strand 3	D	202	207	anti-parallel

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There are 4 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	4	7	first strand
Strand 2	E	19	25	anti-parallel
Strand 3	E	70	75	anti-parallel
Strand 4	E	62	67	anti-parallel

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There are 6 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	10	13	first strand
Strand 2	E	101	105	parallel
Strand 3	E	84	90	anti-parallel
Strand 4	E	33	38	anti-parallel
Strand 5	E	45	49	anti-parallel
Strand 6	E	53	54	anti-parallel

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There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	10	13	first strand
Strand 2	E	101	105	parallel
Strand 3	E	84	90	anti-parallel
Strand 4	E	96	97	anti-parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	30	30	first strand
Strand 2	E	30	31	anti-parallel

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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	113	117	first strand
Strand 2	E	128	138	anti-parallel
Strand 3	E	172	181	anti-parallel
Strand 4	E	158	162	anti-parallel

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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	152	154	first strand
Strand 2	E	144	149	anti-parallel
Strand 3	E	190	196	anti-parallel
Strand 4	E	204	209	anti-parallel

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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	3	7	first strand
Strand 2	F	18	25	anti-parallel
Strand 3	F	75	80	anti-parallel
Strand 4	F	65	70	anti-parallel

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There are 6 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	11	12	first strand
Strand 2	F	105	109	parallel
Strand 3	F	88	96	anti-parallel
Strand 4	F	33	39	anti-parallel
Strand 5	F	46	51	anti-parallel
Strand 6	F	55	57	anti-parallel

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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	11	12	first strand
Strand 2	F	105	109	parallel
Strand 3	F	88	96	anti-parallel
Strand 4	F	100	101	anti-parallel

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There are 4 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	118	122	first strand
Strand 2	F	133	143	anti-parallel
Strand 3	F	173	182	anti-parallel
Strand 4	F	161	163	anti-parallel

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There are 4 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	118	122	first strand
Strand 2	F	133	143	anti-parallel
Strand 3	F	173	182	anti-parallel
Strand 4	F	167	168	anti-parallel

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There are 3 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	149	152	first strand
Strand 2	F	192	197	anti-parallel
Strand 3	F	202	207	anti-parallel

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There are 4 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	4	7	first strand
Strand 2	G	19	25	anti-parallel
Strand 3	G	70	75	anti-parallel
Strand 4	G	62	67	anti-parallel

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There are 6 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	10	13	first strand
Strand 2	G	101	105	parallel
Strand 3	G	84	90	anti-parallel
Strand 4	G	33	38	anti-parallel
Strand 5	G	45	49	anti-parallel
Strand 6	G	53	54	anti-parallel

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There are 4 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	10	13	first strand
Strand 2	G	101	105	parallel
Strand 3	G	84	90	anti-parallel
Strand 4	G	96	97	anti-parallel

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There are 2 strands in AN sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	30	30	first strand
Strand 2	G	30	31	anti-parallel

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There are 4 strands in AO sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	113	117	first strand
Strand 2	G	128	138	anti-parallel
Strand 3	G	172	181	anti-parallel
Strand 4	G	158	162	anti-parallel

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There are 4 strands in AP sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	152	154	first strand
Strand 2	G	144	149	anti-parallel
Strand 3	G	190	196	anti-parallel
Strand 4	G	204	209	anti-parallel

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There are 4 strands in AQ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	7	first strand
Strand 2	H	18	25	anti-parallel
Strand 3	H	75	80	anti-parallel
Strand 4	H	65	70	anti-parallel

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There are 6 strands in AR sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	11	12	first strand
Strand 2	H	105	109	parallel
Strand 3	H	88	96	anti-parallel
Strand 4	H	33	39	anti-parallel
Strand 5	H	46	51	anti-parallel
Strand 6	H	55	57	anti-parallel

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There are 4 strands in AS sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	11	12	first strand
Strand 2	H	105	109	parallel
Strand 3	H	88	96	anti-parallel
Strand 4	H	100	101	anti-parallel

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There are 4 strands in AT sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	118	122	first strand
Strand 2	H	133	143	anti-parallel
Strand 3	H	173	182	anti-parallel
Strand 4	H	161	163	anti-parallel

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There are 4 strands in AU sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	118	122	first strand
Strand 2	H	133	143	anti-parallel
Strand 3	H	173	182	anti-parallel
Strand 4	H	167	168	anti-parallel

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There are 3 strands in AV sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	149	152	first strand
Strand 2	H	192	197	anti-parallel
Strand 3	H	202	207	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2G5B

Analysis of interatomic Contacts of Structural Units in PDB entry:
2G5B