Analysis of interatomic Contacts of Structural Units in PDB entry:
2G5X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2G5X entry

There is 1 chain in PDB entry 2G5X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ARG 1ASN 234
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 2G5X. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
9 26Right-handed alpha
Helix 2
2
A
40 43Right-handed 310
Helix 3
3
A
91 96Right-handed alpha
Helix 4
4
A
98 103Right-handed alpha
Helix 5
5
A
118 127Right-handed alpha
Helix 6
6
A
136 146Right-handed alpha
Helix 7
7
A
153 168Right-handed alpha
Helix 8
8
A
168 174Right-handed alpha
Helix 9
9
A
174 185Right-handed alpha
Helix 10
10
A
192 202Right-handed alpha
Helix 11
11
A
202 211Right-handed alpha
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There is 1 sheet ( A) in PDB entry 2G5X.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
3 5first strand
Strand 2
A
45 51parallel
Strand 3
A
58 64anti-parallel
Strand 4
A
69 76anti-parallel
Strand 5
A
83 87anti-parallel
Strand 6
A
108 109parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il