Analysis of interatomic Contacts of Structural Units in PDB entry:
2G6G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2G6G entry

There is 1 chain in PDB entry 2G6G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 32PRO 441
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 2G6G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
65 69Right-handed 310
Helix 2
2
A
71 75Right-handed 310
Helix 3
3
A
76 92Right-handed alpha
Helix 4
4
A
97 105Right-handed alpha
Helix 5
5
A
110 121Right-handed alpha
Helix 6
6
A
172 176Right-handed 310
Helix 7
7
A
206 208Right-handed 310
Helix 8
8
A
231 237Right-handed alpha
Helix 9
9
A
252 263Right-handed alpha
Helix 10
10
A
289 297Right-handed alpha
Helix 11
11
A
306 317Right-handed alpha
Helix 12
12
A
320 326Right-handed alpha
Helix 13
13
A
411 421Right-handed alpha
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There are 4 sheets in PDB entry 2G6G. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 56first strand
Strand 2
A
59 63anti-parallel
Strand 3
A
122 129anti-parallel
Strand 4
A
422 432anti-parallel
Strand 5
A
371 377anti-parallel
Strand 6
A
384 393anti-parallel
Strand 7
A
358 360parallel
Strand 8
A
403 410anti-parallel
Strand 9
A
134 142parallel
Strand 10
A
422 432anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
157 160first strand
Strand 2
A
246 250anti-parallel
Strand 3
A
144 148anti-parallel
Strand 4
A
264 268parallel
Strand 5
A
274 282anti-parallel
Strand 6
A
332 336anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 170first strand
Strand 2
A
216 222anti-parallel
Strand 3
A
225 228anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 194first strand
Strand 2
A
181 188anti-parallel
Strand 3
A
201 204anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il