Analysis of interatomic Contacts of Structural Units in PDB entry:
2G6W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2G6W entry

There is 1 chain in PDB entry 2G6W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2GLY 384
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 2G6W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 13Right-handed alpha
Helix 2
2
A
15 20Right-handed alpha
Helix 3
3
A
51 54Right-handed 310
Helix 4
4
A
55 70Right-handed alpha
Helix 5
5
A
83 98Right-handed alpha
Helix 6
6
A
107 120Right-handed alpha
Helix 7
7
A
133 143Right-handed alpha
Helix 8
8
A
154 164Right-handed alpha
Helix 9
9
A
186 197Right-handed alpha
Helix 10
10
A
213 217Right-handed 310
Helix 11
11
A
218 223Right-handed alpha
Helix 12
12
A
248 259Right-handed alpha
Helix 13
13
A
259 264Right-handed alpha
Helix 14
14
A
269 285Right-handed alpha
Helix 15
15
A
285 307Right-handed alpha
Helix 16
16
A
327 341Right-handed alpha
Helix 17
17
A
369 383Right-handed alpha
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There are 3 sheets in PDB entry 2G6W. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 36first strand
Strand 2
A
39 43anti-parallel
Strand 3
A
343 344parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
101 105first strand
Strand 2
A
243 247anti-parallel
Strand 3
A
229 233anti-parallel
Strand 4
A
200 204parallel
Strand 5
A
170 175parallel
Strand 6
A
125 129parallel
Strand 7
A
146 150parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
312 313first strand
Strand 2
A
320 326anti-parallel
Strand 3
A
358 363anti-parallel
Strand 4
A
347 348anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il