Analysis of interatomic Contacts of Structural Units in PDB entry:
2G6Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2G6Y entry

There are 8 chains in PDB entry 2G6Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3MET 56
A
 PHE 60PRO 218
B
 LEU 1MET 56
B
 PHE 60PRO 218
C
 PRO 2MET 56
C
 PHE 60ASP 219
D
 ALA 3MET 56
D
 PHE 60ASP 219
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 2G6Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
29 31Right-handed 310
Helix 2
2
A
48 53Right-handed 310
Helix 3
3
A
60 64Right-handed 310
Helix 4
4
A
72 77Right-handed alpha
Helix 5
5
A
78 80Right-handed 310
Helix 6
6
A
125 129Right-handed 310
Helix 7
7
A
181 186Right-handed alpha
Helix 8
8
B
29 31Right-handed 310
Helix 9
9
B
48 53Right-handed 310
Helix 10
10
B
60 64Right-handed 310
Helix 11
11
B
72 77Right-handed alpha
Helix 12
12
B
78 81Right-handed 310
Helix 13
13
B
125 129Right-handed 310
Helix 14
14
B
181 185Right-handed 310
Helix 15
15
C
29 31Right-handed 310
Helix 16
16
C
48 53Right-handed 310
Helix 17
17
C
60 64Right-handed 310
Helix 18
18
C
72 77Right-handed alpha
Helix 19
19
C
78 81Right-handed 310
Helix 20
20
C
125 129Right-handed 310
Helix 21
21
C
181 186Right-handed alpha
Helix 22
22
D
29 31Right-handed 310
Helix 23
23
D
48 53Right-handed 310
Helix 24
24
D
72 77Right-handed alpha
Helix 25
25
D
78 81Right-handed 310
Helix 26
26
D
125 129Right-handed 310
Helix 27
27
D
181 186Right-handed alpha
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There are 4 sheets in PDB entry 2G6Y. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 13 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 135first strand
Strand 2
A
149 160anti-parallel
Strand 3
A
165 176anti-parallel
Strand 4
A
83 91anti-parallel
Strand 5
A
96 106anti-parallel
Strand 6
A
109 119anti-parallel
Strand 7
A
4 14parallel
Strand 8
A
17 28anti-parallel
Strand 9
A
33 40anti-parallel
Strand 10
A
205 215anti-parallel
Strand 11
A
191 199anti-parallel
Strand 12
A
138 144anti-parallel
Strand 13
A
149 160anti-parallel
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There are 13 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
132 135first strand
Strand 2
B
149 160anti-parallel
Strand 3
B
165 176anti-parallel
Strand 4
B
83 91anti-parallel
Strand 5
B
96 106anti-parallel
Strand 6
B
109 119anti-parallel
Strand 7
B
4 14parallel
Strand 8
B
17 28anti-parallel
Strand 9
B
33 40anti-parallel
Strand 10
B
205 215anti-parallel
Strand 11
B
191 199anti-parallel
Strand 12
B
138 144anti-parallel
Strand 13
B
149 160anti-parallel
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There are 13 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
132 135first strand
Strand 2
C
149 160anti-parallel
Strand 3
C
165 176anti-parallel
Strand 4
C
83 91anti-parallel
Strand 5
C
96 106anti-parallel
Strand 6
C
109 119anti-parallel
Strand 7
C
4 14parallel
Strand 8
C
17 28anti-parallel
Strand 9
C
33 40anti-parallel
Strand 10
C
205 215anti-parallel
Strand 11
C
191 199anti-parallel
Strand 12
C
138 146anti-parallel
Strand 13
C
149 160anti-parallel
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There are 13 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
132 135first strand
Strand 2
D
149 160anti-parallel
Strand 3
D
165 176anti-parallel
Strand 4
D
83 91anti-parallel
Strand 5
D
96 106anti-parallel
Strand 6
D
109 119anti-parallel
Strand 7
D
4 14parallel
Strand 8
D
17 28anti-parallel
Strand 9
D
33 40anti-parallel
Strand 10
D
205 215anti-parallel
Strand 11
D
191 199anti-parallel
Strand 12
D
138 146anti-parallel
Strand 13
D
149 160anti-parallel
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