Analysis of interatomic Contacts of Structural Units in PDB entry:
2G7D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2G7D entry

There are 2 chains in PDB entry 2G7D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 1HIS 540
B
 ASP 1HIS 540
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 2G7D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 21Right-handed alpha
Helix 2
2
A
36 42Right-handed alpha
Helix 3
3
A
43 55Right-handed alpha
Helix 4
4
A
67 73Right-handed alpha
Helix 5
5
A
82 87Right-handed alpha
Helix 6
6
A
97 124Right-handed alpha
Helix 7
7
A
184 190Right-handed alpha
Helix 8
8
A
204 218Right-handed alpha
Helix 9
9
A
236 250Right-handed alpha
Helix 10
10
A
315 320Right-handed alpha
Helix 11
11
A
337 341Right-handed 310
Helix 12
12
A
351 354Right-handed 310
Helix 13
13
A
359 375Right-handed alpha
Helix 14
14
A
395 399Right-handed 310
Helix 15
15
A
415 423Right-handed alpha
Helix 16
16
A
492 507Right-handed alpha
Helix 17
17
A
509 516Right-handed alpha
Helix 18
18
A
524 536Right-handed alpha
Helix 19
19
B
8 21Right-handed alpha
Helix 20
20
B
36 42Right-handed alpha
Helix 21
21
B
43 55Right-handed alpha
Helix 22
22
B
67 73Right-handed alpha
Helix 23
23
B
82 87Right-handed alpha
Helix 24
24
B
97 124Right-handed alpha
Helix 25
25
B
184 190Right-handed alpha
Helix 26
26
B
204 218Right-handed alpha
Helix 27
27
B
236 250Right-handed alpha
Helix 28
28
B
315 320Right-handed alpha
Helix 29
29
B
337 341Right-handed 310
Helix 30
30
B
351 354Right-handed 310
Helix 31
31
B
359 375Right-handed alpha
Helix 32
32
B
395 399Right-handed 310
Helix 33
33
B
415 423Right-handed alpha
Helix 34
34
B
492 507Right-handed alpha
Helix 35
35
B
509 516Right-handed alpha
Helix 36
36
B
524 536Right-handed alpha
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There are 12 sheets in PDB entry 2G7D. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 129first strand
Strand 2
A
25 29parallel
Strand 3
A
2 5parallel
Strand 4
A
161 163parallel
Strand 5
A
347 349parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 133first strand
Strand 2
A
145 147anti-parallel
Strand 3
A
153 155anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 169first strand
Strand 2
A
307 309anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 183first strand
Strand 2
A
300 303parallel
Strand 3
A
197 201parallel
Strand 4
A
220 224parallel
Strand 5
A
252 255parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 265first strand
Strand 2
A
271 277anti-parallel
Strand 3
A
294 297anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
401 403first strand
Strand 2
A
408 413anti-parallel
Strand 3
A
485 490anti-parallel
Strand 4
A
471 477anti-parallel
Strand 5
A
426 432anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
126 129first strand
Strand 2
B
25 29parallel
Strand 3
B
2 5parallel
Strand 4
B
161 163parallel
Strand 5
B
347 349parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
131 133first strand
Strand 2
B
145 147anti-parallel
Strand 3
B
153 155anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
167 169first strand
Strand 2
B
307 309anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
182 183first strand
Strand 2
B
300 303parallel
Strand 3
B
197 201parallel
Strand 4
B
220 224parallel
Strand 5
B
252 255parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
258 265first strand
Strand 2
B
271 277anti-parallel
Strand 3
B
294 297anti-parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
401 403first strand
Strand 2
B
408 413anti-parallel
Strand 3
B
485 490anti-parallel
Strand 4
B
471 477anti-parallel
Strand 5
B
426 432anti-parallel
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