Analysis of interatomic Contacts of Structural Units in PDB entry:
2G7P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2G7P entry

There are 2 chains in PDB entry 2G7P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASN 417
B
 MET 1ASN 417
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 2G7P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
52 56Right-handed 310
Helix 2
2
A
79 99Right-handed alpha
Helix 3
3
A
100 113Right-handed alpha
Helix 4
4
A
129 131Right-handed 310
Helix 5
5
A
215 232Right-handed alpha
Helix 6
6
A
259 266Right-handed alpha
Helix 7
7
A
266 271Right-handed alpha
Helix 8
8
A
274 299Right-handed alpha
Helix 9
9
A
308 320Right-handed alpha
Helix 10
10
A
333 347Right-handed alpha
Helix 11
11
A
349 358Right-handed alpha
Helix 12
12
A
394 398Right-handed 310
Helix 13
13
A
400 404Right-handed 310
Helix 14
14
A
408 412Right-handed 310
Helix 15
15
B
79 99Right-handed alpha
Helix 16
16
B
100 113Right-handed alpha
Helix 17
17
B
129 131Right-handed 310
Helix 18
18
B
215 232Right-handed alpha
Helix 19
19
B
259 266Right-handed alpha
Helix 20
20
B
266 271Right-handed alpha
Helix 21
21
B
274 298Right-handed alpha
Helix 22
22
B
308 320Right-handed alpha
Helix 23
23
B
333 346Right-handed alpha
Helix 24
24
B
349 358Right-handed alpha
Helix 25
25
B
400 404Right-handed 310
Helix 26
26
B
408 412Right-handed 310
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There are 11 sheets in PDB entry 2G7P. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 147first strand
Strand 2
A
133 137anti-parallel
Strand 3
A
18 22anti-parallel
Strand 4
A
32 38anti-parallel
Strand 5
A
41 47anti-parallel
Strand 6
A
150 154parallel
Strand 7
A
183 186parallel
Strand 8
A
163 165anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 126first strand
Strand 2
A
301 302parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 213first strand
Strand 2
A
191 196anti-parallel
Strand 3
A
371 374anti-parallel
Strand 4
A
413 416anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
241 244first strand
Strand 2
A
255 258anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
323 324first strand
Strand 2
A
330 331anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 21first strand
Strand 2
B
32 38anti-parallel
Strand 3
B
41 44anti-parallel
Strand 4
B
150 153parallel
Strand 5
B
183 186parallel
Strand 6
B
163 165anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
125 126first strand
Strand 2
B
301 302parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
133 137first strand
Strand 2
B
143 147anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
211 213first strand
Strand 2
B
191 196anti-parallel
Strand 3
B
371 374anti-parallel
Strand 4
B
413 416anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
241 243first strand
Strand 2
B
256 258anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
323 324first strand
Strand 2
B
330 331anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il