Analysis of interatomic Contacts of Structural Units in PDB entry:
2G86


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2G86 entry

There is 1 chain in PDB entry 2G86 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 316
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 2G86. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 15Right-handed alpha
Helix 2
2
A
41 43Right-handed 310
Helix 3
3
A
53 66Right-handed alpha
Helix 4
4
A
71 76Right-handed alpha
Helix 5
5
A
82 92Right-handed alpha
Helix 6
6
A
105 109Right-handed 310
Helix 7
7
A
114 132Right-handed alpha
Helix 8
8
A
132 140Right-handed alpha
Helix 9
9
A
145 152Right-handed alpha
Helix 10
10
A
162 174Right-handed alpha
Helix 11
11
A
189 193Right-handed 310
Helix 12
12
A
225 244Right-handed alpha
Helix 13
13
A
264 273Right-handed alpha
Helix 14
14
A
290 294Right-handed 310
Helix 15
15
A
295 297Right-handed 310
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There are 3 sheets in PDB entry 2G86. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 20first strand
Strand 2
A
28 39anti-parallel
Strand 3
A
247 261anti-parallel
Strand 4
A
210 221parallel
Strand 5
A
199 207anti-parallel
Strand 6
A
181 183anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
153 154first strand
Strand 2
A
160 161anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
281 284first strand
Strand 2
A
299 302anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il