Analysis of interatomic Contacts of Structural Units in PDB entry:
2G8L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2G8L entry

There are 2 chains in PDB entry 2G8L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0LYS 284
B
 LYS 2LEU 287
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 2G8L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 23Right-handed alpha
Helix 2
2
A
25 44Right-handed alpha
Helix 3
3
A
49 66Right-handed alpha
Helix 4
4
A
71 93Right-handed alpha
Helix 5
5
A
96 110Right-handed alpha
Helix 6
6
A
117 130Right-handed alpha
Helix 7
7
A
137 148Right-handed alpha
Helix 8
8
A
159 175Right-handed alpha
Helix 9
9
A
193 200Right-handed alpha
Helix 10
10
A
201 205Right-handed 310
Helix 11
11
A
224 234Right-handed alpha
Helix 12
12
A
241 249Right-handed alpha
Helix 13
13
A
264 272Right-handed alpha
Helix 14
14
B
6 23Right-handed alpha
Helix 15
15
B
25 44Right-handed alpha
Helix 16
16
B
49 66Right-handed alpha
Helix 17
17
B
71 93Right-handed alpha
Helix 18
18
B
96 108Right-handed alpha
Helix 19
19
B
111 115Right-handed 310
Helix 20
20
B
117 129Right-handed alpha
Helix 21
21
B
137 148Right-handed alpha
Helix 22
22
B
159 175Right-handed alpha
Helix 23
23
B
193 200Right-handed alpha
Helix 24
24
B
201 205Right-handed 310
Helix 25
25
B
224 234Right-handed alpha
Helix 26
26
B
241 249Right-handed alpha
Helix 27
27
B
264 272Right-handed alpha
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There are 2 sheets in PDB entry 2G8L. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 136first strand
Strand 2
A
278 282parallel
Strand 3
A
256 261anti-parallel
Strand 4
A
236 240parallel
Strand 5
A
150 154parallel
Strand 6
A
178 183parallel
Strand 7
A
207 210parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
135 136first strand
Strand 2
B
278 282parallel
Strand 3
B
256 261anti-parallel
Strand 4
B
236 240parallel
Strand 5
B
150 154parallel
Strand 6
B
178 183parallel
Strand 7
B
207 210parallel
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