Analysis of interatomic Contacts of Structural Units in PDB entry:
2GA0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2GA0 entry

There are 8 chains in PDB entry 2GA0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 38LEU 201
B
 VAL 38LEU 201
C
 VAL 38LEU 201
D
 VAL 38LEU 201
E
 VAL 38LEU 201
F
 VAL 38LEU 201
G
 VAL 38LEU 201
H
 VAL 38LEU 201
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 2GA0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
40 74Right-handed alpha
Helix 2
2
A
91 113Right-handed alpha
Helix 3
3
A
119 143Right-handed alpha
Helix 4
4
A
143 148Right-handed alpha
Helix 5
5
A
153 162Right-handed alpha
Helix 6
6
A
172 200Right-handed alpha
Helix 7
7
B
41 67Right-handed alpha
Helix 8
8
B
67 73Right-handed alpha
Helix 9
9
B
91 113Right-handed alpha
Helix 10
10
B
119 143Right-handed alpha
Helix 11
11
B
143 148Right-handed alpha
Helix 12
12
B
153 162Right-handed alpha
Helix 13
13
B
172 200Right-handed alpha
Helix 14
14
C
40 73Right-handed alpha
Helix 15
15
C
91 113Right-handed alpha
Helix 16
16
C
119 143Right-handed alpha
Helix 17
17
C
143 148Right-handed alpha
Helix 18
18
C
153 162Right-handed alpha
Helix 19
19
C
172 200Right-handed alpha
Helix 20
20
D
41 74Right-handed alpha
Helix 21
21
D
91 113Right-handed alpha
Helix 22
22
D
119 143Right-handed alpha
Helix 23
23
D
143 148Right-handed alpha
Helix 24
24
D
153 162Right-handed alpha
Helix 25
25
D
172 200Right-handed alpha
Helix 26
26
E
40 74Right-handed alpha
Helix 27
27
E
91 113Right-handed alpha
Helix 28
28
E
119 143Right-handed alpha
Helix 29
29
E
143 148Right-handed alpha
Helix 30
30
E
153 162Right-handed alpha
Helix 31
31
E
172 200Right-handed alpha
Helix 32
32
F
41 73Right-handed alpha
Helix 33
33
F
91 113Right-handed alpha
Helix 34
34
F
119 143Right-handed alpha
Helix 35
35
F
143 148Right-handed alpha
Helix 36
36
F
153 162Right-handed alpha
Helix 37
37
F
172 200Right-handed alpha
Helix 38
38
G
40 73Right-handed alpha
Helix 39
39
G
91 113Right-handed alpha
Helix 40
40
G
119 143Right-handed alpha
Helix 41
41
G
143 148Right-handed alpha
Helix 42
42
G
153 162Right-handed alpha
Helix 43
43
G
172 201Right-handed alpha
Helix 44
44
H
41 73Right-handed alpha
Helix 45
45
H
91 113Right-handed alpha
Helix 46
46
H
119 143Right-handed alpha
Helix 47
47
H
143 148Right-handed alpha
Helix 48
48
H
153 162Right-handed alpha
Helix 49
49
H
172 200Right-handed alpha
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There are 8 sheets in PDB entry 2GA0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 80first strand
Strand 2
A
83 86anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
77 80first strand
Strand 2
B
83 86anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
77 80first strand
Strand 2
C
83 86anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
77 80first strand
Strand 2
D
83 86anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
77 80first strand
Strand 2
E
83 86anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
77 80first strand
Strand 2
F
83 86anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
77 80first strand
Strand 2
G
83 86anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
77 80first strand
Strand 2
H
83 86anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il