Analysis of interatomic Contacts of Structural Units in PDB entry:
2GE6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2GE6 entry

There is 1 chain in PDB entry 2GE6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2PHE 436
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 2GE6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
56 60Right-handed 310
Helix 2
2
A
62 72Right-handed alpha
Helix 3
3
A
72 81Right-handed alpha
Helix 4
4
A
86 99Right-handed alpha
Helix 5
5
A
107 127Right-handed alpha
Helix 6
6
A
129 138Right-handed alpha
Helix 7
7
A
157 160Right-handed 310
Helix 8
8
A
178 202Right-handed alpha
Helix 9
9
A
203 207Right-handed 310
Helix 10
10
A
220 236Right-handed alpha
Helix 11
11
A
248 251Right-handed 310
Helix 12
12
A
268 272Right-handed 310
Helix 13
13
A
274 289Right-handed alpha
Helix 14
14
A
302 311Right-handed alpha
Helix 15
15
A
328 338Right-handed alpha
Helix 16
16
A
347 352Right-handed alpha
Helix 17
17
A
353 367Right-handed alpha
Helix 18
18
A
383 392Right-handed alpha
Helix 19
19
A
404 422Right-handed alpha
Helix 20
20
A
429 432Right-handed 310
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There are 4 sheets in PDB entry 2GE6. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 12first strand
Strand 2
A
18 26anti-parallel
Strand 3
A
29 34anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 146first strand
Strand 2
A
425 427parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 149first strand
Strand 2
A
396 398parallel
Strand 3
A
370 374parallel
Strand 4
A
343 346parallel
Strand 5
A
318 321parallel
Strand 6
A
291 295parallel
Strand 7
A
242 246parallel
Strand 8
A
168 172anti-parallel
Strand 9
A
151 155anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
253 254first strand
Strand 2
A
257 258anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il