Analysis of interatomic Contacts of Structural Units in PDB entry:
2GEG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2GEG entry

There is 1 chain in PDB entry 2GEG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 LEU 27GLN 494
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 2GEG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
C
44 55Right-handed alpha
Helix 2
2
C
72 82Right-handed alpha
Helix 3
3
C
94 102Right-handed alpha
Helix 4
4
C
112 128Right-handed alpha
Helix 5
5
C
134 153Right-handed alpha
Helix 6
6
C
160 178Right-handed alpha
Helix 7
7
C
188 198Right-handed alpha
Helix 8
8
C
206 211Right-handed alpha
Helix 9
9
C
218 238Right-handed alpha
Helix 10
10
C
241 247Right-handed alpha
Helix 11
11
C
255 266Right-handed alpha
Helix 12
12
C
277 310Right-handed alpha
Helix 13
13
C
310 325Right-handed alpha
Helix 14
14
C
336 341Right-handed alpha
Helix 15
15
C
342 356Right-handed alpha
Helix 16
16
C
387 393Right-handed alpha
Helix 17
17
C
405 410Right-handed 310
Helix 18
18
C
423 427Right-handed 310
Helix 19
19
C
430 448Right-handed alpha
Helix 20
20
C
452 456Right-handed 310
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There are 3 sheets in PDB entry 2GEG. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
58 62first strand
Strand 2
C
67 71anti-parallel
Strand 3
C
383 386parallel
Strand 4
C
365 366anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
371 373first strand
Strand 2
C
376 378anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
449 450first strand
Strand 2
C
481 482anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il