Analysis of interatomic Contacts of Structural Units in PDB entry:
2GF0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2GF0 entry

There are 4 chains in PDB entry 2GF0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 4ASN 176
B
 GLU 3ASN 176
C
 ASN 6ASN 176
D
 ASN 6LEU 175
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 2GF0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 30Right-handed alpha
Helix 2
2
A
63 67Right-handed 310
Helix 3
3
A
68 79Right-handed alpha
Helix 4
4
A
90 96Right-handed alpha
Helix 5
5
A
97 109Right-handed alpha
Helix 6
6
A
110 114Right-handed 310
Helix 7
7
A
131 143Right-handed alpha
Helix 8
8
A
156 168Right-handed alpha
Helix 9
9
B
19 30Right-handed alpha
Helix 10
10
B
63 67Right-handed 310
Helix 11
11
B
68 79Right-handed alpha
Helix 12
12
B
90 96Right-handed alpha
Helix 13
13
B
97 109Right-handed alpha
Helix 14
14
B
110 114Right-handed 310
Helix 15
15
B
131 143Right-handed alpha
Helix 16
16
B
156 168Right-handed alpha
Helix 17
17
C
19 30Right-handed alpha
Helix 18
18
C
68 79Right-handed alpha
Helix 19
19
C
90 96Right-handed alpha
Helix 20
20
C
97 109Right-handed alpha
Helix 21
21
C
110 114Right-handed 310
Helix 22
22
C
131 143Right-handed alpha
Helix 23
23
C
156 168Right-handed alpha
Helix 24
24
D
19 30Right-handed alpha
Helix 25
25
D
68 79Right-handed alpha
Helix 26
26
D
90 96Right-handed alpha
Helix 27
27
D
97 109Right-handed alpha
Helix 28
28
D
110 114Right-handed 310
Helix 29
29
D
131 143Right-handed alpha
Helix 30
30
D
156 168Right-handed alpha
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There are 4 sheets in PDB entry 2GF0. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 148first strand
Strand 2
A
116 121parallel
Strand 3
A
81 87parallel
Strand 4
A
8 14parallel
Strand 5
A
53 61parallel
Strand 6
A
42 50anti-parallel
Strand 7
A
173 174anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 148first strand
Strand 2
B
116 121parallel
Strand 3
B
81 87parallel
Strand 4
B
8 14parallel
Strand 5
B
53 61parallel
Strand 6
B
42 50anti-parallel
Strand 7
B
173 174anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
145 148first strand
Strand 2
C
116 121parallel
Strand 3
C
81 87parallel
Strand 4
C
8 13parallel
Strand 5
C
53 61parallel
Strand 6
C
43 50anti-parallel
Strand 7
C
173 174anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
145 148first strand
Strand 2
D
116 121parallel
Strand 3
D
81 87parallel
Strand 4
D
8 13parallel
Strand 5
D
53 61parallel
Strand 6
D
43 50anti-parallel
Strand 7
D
173 174anti-parallel
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