Analysis of interatomic Contacts of Structural Units in PDB entry:
2GH0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2GH0 entry

There are 4 chains in PDB entry 2GH0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 ASP 120LEU 219
D
 PRO 121LEU 219
A
 ASP 158SER 357
B
 SER 159SER 357
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 2GH0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
C
133 135Right-handed 310
Helix 2
2
C
154 158Right-handed 310
Helix 3
3
C
159 171Right-handed alpha
Helix 4
4
D
133 135Right-handed 310
Helix 5
5
D
159 172Right-handed alpha
Helix 6
6
A
160 171Right-handed alpha
Helix 7
7
A
172 186Right-handed alpha
Helix 8
8
A
192 207Right-handed alpha
Helix 9
9
A
208 217Right-handed alpha
Helix 10
10
A
224 234Right-handed alpha
Helix 11
11
A
236 241Right-handed alpha
Helix 12
12
A
247 257Right-handed alpha
Helix 13
13
A
258 272Right-handed alpha
Helix 14
14
A
284 294Right-handed alpha
Helix 15
15
A
321 323Right-handed 310
Helix 16
16
A
324 337Right-handed alpha
Helix 17
17
A
338 356Right-handed alpha
Helix 18
18
B
160 172Right-handed alpha
Helix 19
19
B
172 186Right-handed alpha
Helix 20
20
B
192 207Right-handed alpha
Helix 21
21
B
208 217Right-handed alpha
Helix 22
22
B
224 234Right-handed alpha
Helix 23
23
B
236 241Right-handed alpha
Helix 24
24
B
247 257Right-handed alpha
Helix 25
25
B
258 272Right-handed alpha
Helix 26
26
B
284 294Right-handed alpha
Helix 27
27
B
321 323Right-handed 310
Helix 28
28
B
324 337Right-handed alpha
Helix 29
29
B
338 357Right-handed alpha
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There are 6 sheets in PDB entry 2GH0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
124 131first strand
Strand 2
C
144 151anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
187 199first strand
Strand 2
C
205 219anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
124 131first strand
Strand 2
D
144 151anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
187 199first strand
Strand 2
D
205 219anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
302 304first strand
Strand 2
A
312 314anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
302 304first strand
Strand 2
B
312 314anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il