Analysis of interatomic Contacts of Structural Units in PDB entry:
2GIL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2GIL entry

There are 4 chains in PDB entry 2GIL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 14LEU 174
B
 LYS 13LEU 174
C
 PHE 14LEU 174
D
 PHE 14LEU 174
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 2GIL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
25 36Right-handed alpha
Helix 2
2
A
72 76Right-handed 310
Helix 3
3
A
78 85Right-handed alpha
Helix 4
4
A
97 103Right-handed alpha
Helix 5
5
A
103 116Right-handed alpha
Helix 6
6
A
130 134Right-handed 310
Helix 7
7
A
137 148Right-handed alpha
Helix 8
8
A
162 172Right-handed alpha
Helix 9
9
B
25 36Right-handed alpha
Helix 10
10
B
72 78Right-handed 310
Helix 11
11
B
79 86Right-handed alpha
Helix 12
12
B
97 103Right-handed alpha
Helix 13
13
B
103 116Right-handed alpha
Helix 14
14
B
130 134Right-handed 310
Helix 15
15
B
137 149Right-handed alpha
Helix 16
16
B
162 174Right-handed alpha
Helix 17
17
C
25 36Right-handed alpha
Helix 18
18
C
72 77Right-handed 310
Helix 19
19
C
78 86Right-handed alpha
Helix 20
20
C
97 103Right-handed alpha
Helix 21
21
C
103 116Right-handed alpha
Helix 22
22
C
130 134Right-handed 310
Helix 23
23
C
137 149Right-handed alpha
Helix 24
24
C
162 172Right-handed alpha
Helix 25
25
D
25 36Right-handed alpha
Helix 26
26
D
72 78Right-handed 310
Helix 27
27
D
79 85Right-handed alpha
Helix 28
28
D
97 103Right-handed alpha
Helix 29
29
D
103 116Right-handed alpha
Helix 30
30
D
130 134Right-handed 310
Helix 31
31
D
137 149Right-handed alpha
Helix 32
32
D
162 174Right-handed alpha
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There are 2 sheets in PDB entry 2GIL. Click on sheet of interest to get list of strands forming it: A, B,

There are 12 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 154first strand
Strand 2
A
120 126parallel
Strand 3
A
88 94parallel
Strand 4
A
15 19parallel
Strand 5
A
61 68parallel
Strand 6
A
49 56anti-parallel
Strand 7
B
48 56anti-parallel
Strand 8
B
61 69anti-parallel
Strand 9
B
14 19parallel
Strand 10
B
88 94parallel
Strand 11
B
120 126parallel
Strand 12
B
151 154parallel
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There are 12 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
151 155first strand
Strand 2
C
120 126parallel
Strand 3
C
88 94parallel
Strand 4
C
15 19parallel
Strand 5
C
60 69parallel
Strand 6
C
48 57anti-parallel
Strand 7
D
48 56anti-parallel
Strand 8
D
61 69anti-parallel
Strand 9
D
15 20parallel
Strand 10
D
88 94parallel
Strand 11
D
120 126parallel
Strand 12
D
151 154parallel
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