Analysis of interatomic Contacts of Structural Units in PDB entry:
2GL0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2GL0 entry

There are 6 chains in PDB entry 2GL0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 5LEU 167
B
 SER 5LEU 167
C
 ILE 6LEU 167
D
 SER 5LEU 167
E
 SER 5LEU 167
F
 ILE 6LEU 167
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 2GL0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
30 41Right-handed alpha
Helix 2
2
A
67 82Right-handed alpha
Helix 3
3
A
95 98Right-handed 310
Helix 4
4
A
99 105Right-handed alpha
Helix 5
5
A
148 162Right-handed alpha
Helix 6
6
B
30 41Right-handed alpha
Helix 7
7
B
67 82Right-handed alpha
Helix 8
8
B
95 98Right-handed 310
Helix 9
9
B
99 106Right-handed alpha
Helix 10
10
B
148 161Right-handed alpha
Helix 11
11
C
30 41Right-handed alpha
Helix 12
12
C
67 82Right-handed alpha
Helix 13
13
C
95 105Right-handed alpha
Helix 14
14
C
148 161Right-handed alpha
Helix 15
15
D
30 41Right-handed alpha
Helix 16
16
D
67 82Right-handed alpha
Helix 17
17
D
95 98Right-handed 310
Helix 18
18
D
99 105Right-handed alpha
Helix 19
19
D
148 162Right-handed alpha
Helix 20
20
E
30 43Right-handed alpha
Helix 21
21
E
67 82Right-handed alpha
Helix 22
22
E
95 98Right-handed 310
Helix 23
23
E
99 105Right-handed alpha
Helix 24
24
E
148 162Right-handed alpha
Helix 25
25
F
30 41Right-handed alpha
Helix 26
26
F
67 82Right-handed alpha
Helix 27
27
F
95 105Right-handed alpha
Helix 28
28
F
148 162Right-handed alpha
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There are 12 sheets in PDB entry 2GL0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 13first strand
Strand 2
A
120 128anti-parallel
Strand 3
A
131 139anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 116first strand
Strand 2
A
19 25anti-parallel
Strand 3
A
86 92anti-parallel
Strand 4
A
47 53anti-parallel
Strand 5
A
60 65anti-parallel
Strand 6
B
145 146parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 146first strand
Strand 2
C
60 65parallel
Strand 3
C
47 53anti-parallel
Strand 4
C
86 92anti-parallel
Strand 5
C
20 25anti-parallel
Strand 6
C
111 116anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 13first strand
Strand 2
B
120 128anti-parallel
Strand 3
B
131 139anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
111 116first strand
Strand 2
B
20 25anti-parallel
Strand 3
B
86 92anti-parallel
Strand 4
B
47 53anti-parallel
Strand 5
B
60 65anti-parallel
Strand 6
C
145 146parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
7 12first strand
Strand 2
C
120 128anti-parallel
Strand 3
C
131 139anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
7 12first strand
Strand 2
D
120 128anti-parallel
Strand 3
D
131 139anti-parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
111 116first strand
Strand 2
D
20 25anti-parallel
Strand 3
D
86 92anti-parallel
Strand 4
D
47 53anti-parallel
Strand 5
D
60 65anti-parallel
Strand 6
E
145 146parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
145 146first strand
Strand 2
F
60 65parallel
Strand 3
F
47 53anti-parallel
Strand 4
F
86 92anti-parallel
Strand 5
F
20 25anti-parallel
Strand 6
F
111 116anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
7 12first strand
Strand 2
E
120 126anti-parallel
Strand 3
E
132 139anti-parallel
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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
111 116first strand
Strand 2
E
20 25anti-parallel
Strand 3
E
86 92anti-parallel
Strand 4
E
47 53anti-parallel
Strand 5
E
60 65anti-parallel
Strand 6
F
145 146parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
7 12first strand
Strand 2
F
120 128anti-parallel
Strand 3
F
131 139anti-parallel
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