Analysis of interatomic Contacts of Structural Units in PDB entry:
2GLU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2GLU entry

There are 2 chains in PDB entry 2GLU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -3GLY 230
B
 HIS -3GLY 230
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 2GLU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
-3 9Right-handed alpha
Helix 2
2
A
24 31Right-handed alpha
Helix 3
3
A
32 34Right-handed 310
Helix 4
4
A
43 57Right-handed alpha
Helix 5
5
A
68 72Right-handed 310
Helix 6
6
A
87 91Right-handed 310
Helix 7
7
A
93 105Right-handed alpha
Helix 8
8
A
121 136Right-handed alpha
Helix 9
9
A
144 155Right-handed alpha
Helix 10
10
A
171 179Right-handed alpha
Helix 11
11
A
181 194Right-handed alpha
Helix 12
12
A
196 203Right-handed alpha
Helix 13
13
B
-3 9Right-handed alpha
Helix 14
14
B
24 31Right-handed alpha
Helix 15
15
B
32 34Right-handed 310
Helix 16
16
B
43 57Right-handed alpha
Helix 17
17
B
68 72Right-handed 310
Helix 18
18
B
87 91Right-handed 310
Helix 19
19
B
93 104Right-handed alpha
Helix 20
20
B
121 136Right-handed alpha
Helix 21
21
B
144 154Right-handed alpha
Helix 22
22
B
171 179Right-handed alpha
Helix 23
23
B
181 194Right-handed alpha
Helix 24
24
B
196 203Right-handed alpha
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There are 4 sheets in PDB entry 2GLU. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 66first strand
Strand 2
A
36 41parallel
Strand 3
A
15 19parallel
Strand 4
A
81 85parallel
Strand 5
A
110 116parallel
Strand 6
A
213 227anti-parallel
Strand 7
A
157 170anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 66first strand
Strand 2
A
36 41parallel
Strand 3
A
15 19parallel
Strand 4
A
81 85parallel
Strand 5
A
110 116parallel
Strand 6
A
213 227anti-parallel
Strand 7
A
206 207anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
62 66first strand
Strand 2
B
36 41parallel
Strand 3
B
15 19parallel
Strand 4
B
79 85parallel
Strand 5
B
105 116parallel
Strand 6
B
213 227anti-parallel
Strand 7
B
157 170anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
62 66first strand
Strand 2
B
36 41parallel
Strand 3
B
15 19parallel
Strand 4
B
79 85parallel
Strand 5
B
105 116parallel
Strand 6
B
213 227anti-parallel
Strand 7
B
206 207anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il