Analysis of interatomic Contacts of Structural Units in PDB entry:
2GNO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2GNO entry

There is 1 chain in PDB entry 2GNO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 11ARG 306
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 2GNO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 22Right-handed alpha
Helix 2
2
A
36 51Right-handed alpha
Helix 3
3
A
70 82Right-handed alpha
Helix 4
4
A
97 101Right-handed 310
Helix 5
5
A
102 109Right-handed alpha
Helix 6
6
A
109 115Right-handed alpha
Helix 7
7
A
128 132Right-handed 310
Helix 8
8
A
133 138Right-handed alpha
Helix 9
9
A
148 160Right-handed alpha
Helix 10
10
A
161 166Right-handed alpha
Helix 11
11
A
167 171Right-handed 310
Helix 12
12
A
172 197Right-handed alpha
Helix 13
13
A
198 203Right-handed alpha
Helix 14
14
A
209 227Right-handed alpha
Helix 15
15
A
228 230Right-handed 310
Helix 16
16
A
231 243Right-handed alpha
Helix 17
17
A
245 262Right-handed alpha
Helix 18
18
A
267 282Right-handed alpha
Helix 19
19
A
283 288Right-handed 310
Helix 20
20
A
289 306Right-handed alpha
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There is 1 sheet ( A) in PDB entry 2GNO.

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 62first strand
Strand 2
A
91 95parallel
Strand 3
A
120 126parallel
Strand 4
A
26 31parallel
Strand 5
A
141 144parallel
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