Analysis of interatomic Contacts of Structural Units in PDB entry:
2GO5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2GO5 entry

There are 9 chains in PDB entry 2GO5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 G 112 U 238
9
 C 2825 A 2914
B
 ARG 14GLN 120
W
 GLN 326MET 434
1
 HIS -1ILE 130
2
 ARG 63ALA 269
5
 GLY 4ARG 67
4
 GLN 69ILE 149
6
 THR 17LEU 97
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 2GO5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
B
19 24Right-handed 310
Helix 2
2
B
45 54Right-handed alpha
Helix 3
3
B
55 57Right-handed 310
Helix 4
4
B
101 112Right-handed alpha
Helix 5
5
B
115 120Right-handed alpha
Helix 6
6
W
328 342Right-handed alpha
Helix 7
7
W
345 350Right-handed alpha
Helix 8
8
W
365 380Right-handed alpha
Helix 9
9
W
383 389Right-handed alpha
Helix 10
10
W
391 399Right-handed alpha
Helix 11
11
W
400 410Right-handed alpha
Helix 12
12
W
413 433Right-handed alpha
Helix 13
13
1
28 36Right-handed alpha
Helix 14
14
1
37 40Right-handed 310
Helix 15
15
1
72 74Right-handed 310
Helix 16
16
1
75 94Right-handed alpha
Helix 17
17
1
94 100Right-handed alpha
Helix 18
18
1
103 108Right-handed alpha
Helix 19
19
1
113 125Right-handed alpha
Helix 20
20
2
74 85Right-handed alpha
Helix 21
21
2
119 131Right-handed alpha
Helix 22
22
2
145 166Right-handed alpha
Helix 23
23
2
187 206Right-handed alpha
Helix 24
24
2
231 235Right-handed 310
Helix 25
25
2
258 269Right-handed alpha
Helix 26
26
5
7 14Right-handed alpha
Helix 27
27
5
15 38Right-handed alpha
Helix 28
28
5
45 66Right-handed alpha
Helix 29
29
4
79 89Right-handed alpha
Helix 30
30
4
102 114Right-handed alpha
Helix 31
31
4
142 148Right-handed alpha
Helix 32
32
6
24 31Right-handed 310
Helix 33
33
6
32 34Right-handed 310
Helix 34
34
6
35 51Right-handed alpha
Helix 35
35
6
60 68Right-handed alpha
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There are 5 sheets in PDB entry 2GO5. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 18first strand
Strand 2
B
81 85anti-parallel
Strand 3
B
59 63anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
14 18first strand
Strand 2
1
4 9anti-parallel
Strand 3
1
64 69anti-parallel
Strand 4
1
54 59anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
97 102first strand
Strand 2
2
110 115anti-parallel
Strand 3
2
64 68parallel
Strand 4
2
134 142parallel
Strand 5
2
239 243parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
4
73 76first strand
Strand 2
4
91 96anti-parallel
Strand 3
4
130 136anti-parallel
Strand 4
4
117 123anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
6
18 22first strand
Strand 2
6
79 86anti-parallel
Strand 3
6
91 95anti-parallel
Strand 4
6
58 59parallel
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