Analysis of interatomic Contacts of Structural Units in PDB entry:
2GO7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2GO7 entry

There are 4 chains in PDB entry 2GO7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3LYS 206
B
 LYS 3GLU 204
C
 GLY 0GLU 204
D
 LYS 3THR 205
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 2GO7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 33Right-handed alpha
Helix 2
2
A
37 48Right-handed alpha
Helix 3
3
A
49 62Right-handed alpha
Helix 4
4
A
64 77Right-handed alpha
Helix 5
5
A
78 83Right-handed 310
Helix 6
6
A
88 99Right-handed alpha
Helix 7
7
A
111 120Right-handed alpha
Helix 8
8
A
122 124Right-handed 310
Helix 9
9
A
131 135Right-handed 310
Helix 10
10
A
142 153Right-handed alpha
Helix 11
11
A
155 157Right-handed 310
Helix 12
12
A
165 176Right-handed alpha
Helix 13
13
A
197 203Right-handed alpha
Helix 14
14
B
17 32Right-handed alpha
Helix 15
15
B
37 48Right-handed alpha
Helix 16
16
B
49 62Right-handed alpha
Helix 17
17
B
64 78Right-handed alpha
Helix 18
18
B
79 83Right-handed 310
Helix 19
19
B
88 100Right-handed alpha
Helix 20
20
B
111 120Right-handed alpha
Helix 21
21
B
122 126Right-handed 310
Helix 22
22
B
131 135Right-handed 310
Helix 23
23
B
142 152Right-handed alpha
Helix 24
24
B
155 157Right-handed 310
Helix 25
25
B
165 176Right-handed alpha
Helix 26
26
B
197 204Right-handed alpha
Helix 27
27
C
17 32Right-handed alpha
Helix 28
28
C
37 48Right-handed alpha
Helix 29
29
C
49 62Right-handed alpha
Helix 30
30
C
64 78Right-handed alpha
Helix 31
31
C
79 83Right-handed 310
Helix 32
32
C
88 99Right-handed alpha
Helix 33
33
C
111 120Right-handed alpha
Helix 34
34
C
122 126Right-handed 310
Helix 35
35
C
131 135Right-handed 310
Helix 36
36
C
142 152Right-handed alpha
Helix 37
37
C
155 157Right-handed 310
Helix 38
38
C
165 176Right-handed alpha
Helix 39
39
C
197 202Right-handed alpha
Helix 40
40
D
17 32Right-handed alpha
Helix 41
41
D
37 48Right-handed alpha
Helix 42
42
D
49 62Right-handed alpha
Helix 43
43
D
64 78Right-handed alpha
Helix 44
44
D
79 83Right-handed 310
Helix 45
45
D
88 99Right-handed alpha
Helix 46
46
D
111 120Right-handed alpha
Helix 47
47
D
122 126Right-handed 310
Helix 48
48
D
131 135Right-handed 310
Helix 49
49
D
142 152Right-handed alpha
Helix 50
50
D
155 157Right-handed 310
Helix 51
51
D
165 176Right-handed alpha
Helix 52
52
D
197 204Right-handed alpha
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There are 8 sheets in PDB entry 2GO7. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 130first strand
Strand 2
A
102 106parallel
Strand 3
A
5 8parallel
Strand 4
A
159 163parallel
Strand 5
A
178 181parallel
Strand 6
A
190 192parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 16first strand
Strand 2
A
84 85anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
128 130first strand
Strand 2
B
102 106parallel
Strand 3
B
5 8parallel
Strand 4
B
159 163parallel
Strand 5
B
178 181parallel
Strand 6
B
190 192parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
15 16first strand
Strand 2
B
84 85anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
128 130first strand
Strand 2
C
102 106parallel
Strand 3
C
5 8parallel
Strand 4
C
159 163parallel
Strand 5
C
178 181parallel
Strand 6
C
190 192parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
15 16first strand
Strand 2
C
84 85anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
128 130first strand
Strand 2
D
102 106parallel
Strand 3
D
5 8parallel
Strand 4
D
159 163parallel
Strand 5
D
178 181parallel
Strand 6
D
190 192parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
15 16first strand
Strand 2
D
84 85anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il