Analysis of interatomic Contacts of Structural Units in PDB entry:
2GOY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2GOY entry

There are 8 chains in PDB entry 2GOY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 28GLU 249
B
 PRO 27GLU 249
C
 PHE 28GLU 249
D
 PRO 27GLU 249
E
 PHE 28GLU 249
F
 PRO 27GLU 249
G
 PHE 28GLU 249
H
 PRO 27GLU 249
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are106 helices in PDB entry 2GOY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
29 38Right-handed alpha
Helix 2
2
A
41 54Right-handed alpha
Helix 3
3
A
66 77Right-handed alpha
Helix 4
4
A
91 106Right-handed alpha
Helix 5
5
A
115 127Right-handed alpha
Helix 6
6
A
129 135Right-handed alpha
Helix 7
7
A
136 144Right-handed alpha
Helix 8
8
A
144 154Right-handed alpha
Helix 9
9
A
163 167Right-handed 310
Helix 10
10
A
200 211Right-handed alpha
Helix 11
11
A
216 222Right-handed 310
Helix 12
12
A
228 232Right-handed 310
Helix 13
13
A
240 245Right-handed 310
Helix 14
14
B
32 37Right-handed alpha
Helix 15
15
B
41 54Right-handed alpha
Helix 16
16
B
66 77Right-handed alpha
Helix 17
17
B
91 106Right-handed alpha
Helix 18
18
B
115 127Right-handed alpha
Helix 19
19
B
130 135Right-handed alpha
Helix 20
20
B
136 144Right-handed alpha
Helix 21
21
B
144 152Right-handed alpha
Helix 22
22
B
195 199Right-handed 310
Helix 23
23
B
200 211Right-handed alpha
Helix 24
24
B
216 221Right-handed 310
Helix 25
25
B
240 245Right-handed 310
Helix 26
26
C
29 38Right-handed alpha
Helix 27
27
C
41 54Right-handed alpha
Helix 28
28
C
66 77Right-handed alpha
Helix 29
29
C
91 106Right-handed alpha
Helix 30
30
C
115 127Right-handed alpha
Helix 31
31
C
130 135Right-handed alpha
Helix 32
32
C
136 144Right-handed alpha
Helix 33
33
C
144 154Right-handed alpha
Helix 34
34
C
163 167Right-handed 310
Helix 35
35
C
195 199Right-handed 310
Helix 36
36
C
200 211Right-handed alpha
Helix 37
37
C
216 221Right-handed 310
Helix 38
38
C
228 232Right-handed 310
Helix 39
39
C
240 245Right-handed 310
Helix 40
40
D
31 37Right-handed alpha
Helix 41
41
D
41 54Right-handed alpha
Helix 42
42
D
66 77Right-handed alpha
Helix 43
43
D
91 106Right-handed alpha
Helix 44
44
D
115 127Right-handed alpha
Helix 45
45
D
130 135Right-handed alpha
Helix 46
46
D
136 144Right-handed alpha
Helix 47
47
D
144 154Right-handed alpha
Helix 48
48
D
163 167Right-handed 310
Helix 49
49
D
200 211Right-handed alpha
Helix 50
50
D
216 221Right-handed 310
Helix 51
51
D
228 232Right-handed 310
Helix 52
52
D
240 245Right-handed 310
Helix 53
53
E
29 38Right-handed alpha
Helix 54
54
E
41 54Right-handed alpha
Helix 55
55
E
66 77Right-handed alpha
Helix 56
56
E
91 106Right-handed alpha
Helix 57
57
E
115 127Right-handed alpha
Helix 58
58
E
129 135Right-handed alpha
Helix 59
59
E
136 144Right-handed alpha
Helix 60
60
E
144 154Right-handed alpha
Helix 61
61
E
163 167Right-handed 310
Helix 62
62
E
195 199Right-handed 310
Helix 63
63
E
200 211Right-handed alpha
Helix 64
64
E
216 221Right-handed 310
Helix 65
65
E
228 232Right-handed 310
Helix 66
66
E
240 245Right-handed 310
Helix 67
67
F
32 37Right-handed alpha
Helix 68
68
F
41 54Right-handed alpha
Helix 69
69
F
66 77Right-handed alpha
Helix 70
70
F
91 106Right-handed alpha
Helix 71
71
F
115 127Right-handed alpha
Helix 72
72
F
130 135Right-handed alpha
Helix 73
73
F
136 144Right-handed alpha
Helix 74
74
F
144 152Right-handed alpha
Helix 75
75
F
153 155Right-handed 310
Helix 76
76
F
163 167Right-handed 310
Helix 77
77
F
200 211Right-handed alpha
Helix 78
78
F
216 222Right-handed 310
Helix 79
79
F
228 232Right-handed 310
Helix 80
80
F
240 245Right-handed 310
Helix 81
81
G
29 37Right-handed alpha
Helix 82
82
G
41 54Right-handed alpha
Helix 83
83
G
66 77Right-handed alpha
Helix 84
84
G
91 106Right-handed alpha
Helix 85
85
G
115 127Right-handed alpha
Helix 86
86
G
130 135Right-handed alpha
Helix 87
87
G
136 144Right-handed alpha
Helix 88
88
G
144 154Right-handed alpha
Helix 89
89
G
163 167Right-handed 310
Helix 90
90
G
195 199Right-handed 310
Helix 91
91
G
200 211Right-handed alpha
Helix 92
92
G
216 221Right-handed 310
Helix 93
93
G
228 232Right-handed 310
Helix 94
94
G
240 245Right-handed 310
Helix 95
95
H
32 37Right-handed alpha
Helix 96
96
H
41 54Right-handed alpha
Helix 97
97
H
66 77Right-handed alpha
Helix 98
98
H
91 106Right-handed alpha
Helix 99
99
H
115 127Right-handed alpha
Helix 100
100
H
130 135Right-handed alpha
Helix 101
101
H
136 144Right-handed alpha
Helix 102
102
H
144 152Right-handed alpha
Helix 103
103
H
163 167Right-handed 310
Helix 104
104
H
200 211Right-handed alpha
Helix 105
105
H
216 221Right-handed 310
Helix 106
106
H
240 245Right-handed 310
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There are 8 sheets in PDB entry 2GOY. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 112first strand
Strand 2
A
82 85parallel
Strand 3
A
57 60parallel
Strand 4
A
157 159parallel
Strand 5
A
191 193parallel
Strand 6
A
177 179anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
110 112first strand
Strand 2
B
81 85parallel
Strand 3
B
58 60parallel
Strand 4
B
157 159parallel
Strand 5
B
191 193parallel
Strand 6
B
177 179anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
110 112first strand
Strand 2
C
82 85parallel
Strand 3
C
57 60parallel
Strand 4
C
157 159parallel
Strand 5
C
191 193parallel
Strand 6
C
177 179anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
110 112first strand
Strand 2
D
81 85parallel
Strand 3
D
58 60parallel
Strand 4
D
157 159parallel
Strand 5
D
191 193parallel
Strand 6
D
177 179anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
110 112first strand
Strand 2
E
81 85parallel
Strand 3
E
57 60parallel
Strand 4
E
157 159parallel
Strand 5
E
191 193parallel
Strand 6
E
177 179anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
110 112first strand
Strand 2
F
81 85parallel
Strand 3
F
58 60parallel
Strand 4
F
157 159parallel
Strand 5
F
191 193parallel
Strand 6
F
177 179anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
110 112first strand
Strand 2
G
82 85parallel
Strand 3
G
57 60parallel
Strand 4
G
157 159parallel
Strand 5
G
191 193parallel
Strand 6
G
177 179anti-parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
110 112first strand
Strand 2
H
81 85parallel
Strand 3
H
58 60parallel
Strand 4
H
157 159parallel
Strand 5
H
191 193parallel
Strand 6
H
177 179anti-parallel
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