Analysis of interatomic Contacts of Structural Units in PDB entry:
2GP6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2GP6 entry

There are 2 chains in PDB entry 2GP6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 3TYR 417
B
 HIS 3TYR 417
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 2GP6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
27 37Right-handed alpha
Helix 2
2
A
47 54Right-handed alpha
Helix 3
3
A
72 78Right-handed alpha
Helix 4
4
A
80 97Right-handed alpha
Helix 5
5
A
118 129Right-handed alpha
Helix 6
6
A
139 145Right-handed alpha
Helix 7
7
A
147 157Right-handed alpha
Helix 8
8
A
168 170Right-handed 310
Helix 9
9
A
171 186Right-handed alpha
Helix 10
10
A
202 211Right-handed alpha
Helix 11
11
A
251 256Right-handed alpha
Helix 12
12
A
284 298Right-handed alpha
Helix 13
13
A
315 331Right-handed alpha
Helix 14
14
A
340 345Right-handed alpha
Helix 15
15
A
350 366Right-handed alpha
Helix 16
16
B
27 37Right-handed alpha
Helix 17
17
B
72 79Right-handed alpha
Helix 18
18
B
80 97Right-handed alpha
Helix 19
19
B
118 126Right-handed alpha
Helix 20
20
B
140 145Right-handed alpha
Helix 21
21
B
147 157Right-handed alpha
Helix 22
22
B
168 170Right-handed 310
Helix 23
23
B
171 187Right-handed alpha
Helix 24
24
B
202 211Right-handed alpha
Helix 25
25
B
251 257Right-handed alpha
Helix 26
26
B
284 298Right-handed alpha
Helix 27
27
B
301 303Right-handed 310
Helix 28
28
B
315 330Right-handed alpha
Helix 29
29
B
339 343Right-handed 310
Helix 30
30
B
350 366Right-handed alpha
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There are 4 sheets in PDB entry 2GP6. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 11 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 164first strand
Strand 2
A
107 112parallel
Strand 3
A
191 197parallel
Strand 4
A
243 250anti-parallel
Strand 5
A
13 21anti-parallel
Strand 6
A
263 272anti-parallel
Strand 7
A
408 415anti-parallel
Strand 8
A
397 404anti-parallel
Strand 9
A
305 309parallel
Strand 10
A
336 337parallel
Strand 11
A
384 385parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 44first strand
Strand 2
A
59 61anti-parallel
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There are 12 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 167first strand
Strand 2
B
163 166anti-parallel
Strand 3
B
107 112parallel
Strand 4
B
191 197parallel
Strand 5
B
243 250anti-parallel
Strand 6
B
13 21anti-parallel
Strand 7
B
263 272anti-parallel
Strand 8
B
408 416anti-parallel
Strand 9
B
397 404anti-parallel
Strand 10
B
305 309parallel
Strand 11
B
336 338parallel
Strand 12
B
384 385parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 44first strand
Strand 2
B
59 60anti-parallel
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