Analysis of interatomic Contacts of Structural Units in PDB entry:
2GP7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2GP7 entry

There are 4 chains in PDB entry 2GP7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 235VAL 458
B
 TYR 234VAL 458
C
 ASN 235VAL 458
D
 ASN 235VAL 458
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 2GP7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
235 245Right-handed alpha
Helix 2
2
A
260 284Right-handed alpha
Helix 3
3
A
288 292Right-handed 310
Helix 4
4
A
293 317Right-handed alpha
Helix 5
5
A
333 341Right-handed alpha
Helix 6
6
A
342 359Right-handed alpha
Helix 7
7
A
362 376Right-handed alpha
Helix 8
8
A
384 407Right-handed alpha
Helix 9
9
A
412 419Right-handed alpha
Helix 10
10
A
420 442Right-handed alpha
Helix 11
11
A
447 458Right-handed alpha
Helix 12
12
B
235 245Right-handed alpha
Helix 13
13
B
260 284Right-handed alpha
Helix 14
14
B
293 317Right-handed alpha
Helix 15
15
B
333 341Right-handed alpha
Helix 16
16
B
342 360Right-handed alpha
Helix 17
17
B
362 376Right-handed alpha
Helix 18
18
B
384 407Right-handed alpha
Helix 19
19
B
412 419Right-handed alpha
Helix 20
20
B
420 442Right-handed alpha
Helix 21
21
B
447 458Right-handed alpha
Helix 22
22
C
235 245Right-handed alpha
Helix 23
23
C
260 284Right-handed alpha
Helix 24
24
C
288 292Right-handed 310
Helix 25
25
C
293 317Right-handed alpha
Helix 26
26
C
333 341Right-handed alpha
Helix 27
27
C
342 360Right-handed alpha
Helix 28
28
C
362 376Right-handed alpha
Helix 29
29
C
384 407Right-handed alpha
Helix 30
30
C
412 419Right-handed alpha
Helix 31
31
C
420 442Right-handed alpha
Helix 32
32
C
447 458Right-handed alpha
Helix 33
33
D
235 245Right-handed alpha
Helix 34
34
D
260 284Right-handed alpha
Helix 35
35
D
293 317Right-handed alpha
Helix 36
36
D
333 341Right-handed alpha
Helix 37
37
D
342 360Right-handed alpha
Helix 38
38
D
362 376Right-handed alpha
Helix 39
39
D
384 407Right-handed alpha
Helix 40
40
D
412 419Right-handed alpha
Helix 41
41
D
420 442Right-handed alpha
Helix 42
42
D
447 458Right-handed alpha
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There are 4 sheets in PDB entry 2GP7. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
324 327first strand
Strand 2
A
330 332anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
324 327first strand
Strand 2
B
330 332anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
324 327first strand
Strand 2
C
330 332anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
324 327first strand
Strand 2
D
330 332anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il