Analysis of interatomic Contacts of Structural Units in PDB entry:
2GRM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2GRM entry

There are 5 chains in PDB entry 2GRM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 315
B
 MET 1GLU 315
C
 MET 1GLU 294
D
 ALA 1ILE 7
E
 ALA 1ILE 7
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 2GRM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 15Right-handed alpha
Helix 2
2
A
19 24Right-handed alpha
Helix 3
3
A
28 36Right-handed alpha
Helix 4
4
A
43 55Right-handed alpha
Helix 5
5
A
57 65Right-handed alpha
Helix 6
6
A
73 88Right-handed alpha
Helix 7
7
A
91 100Right-handed alpha
Helix 8
8
A
101 103Right-handed 310
Helix 9
9
A
106 123Right-handed alpha
Helix 10
10
A
127 142Right-handed alpha
Helix 11
11
A
149 163Right-handed alpha
Helix 12
12
A
164 173Right-handed alpha
Helix 13
13
A
174 176Right-handed 310
Helix 14
14
A
183 204Right-handed alpha
Helix 15
15
A
206 221Right-handed alpha
Helix 16
16
A
229 249Right-handed alpha
Helix 17
17
A
250 267Right-handed alpha
Helix 18
18
A
269 286Right-handed alpha
Helix 19
19
A
292 303Right-handed alpha
Helix 20
20
B
3 15Right-handed alpha
Helix 21
21
B
18 24Right-handed alpha
Helix 22
22
B
28 36Right-handed alpha
Helix 23
23
B
43 55Right-handed alpha
Helix 24
24
B
57 65Right-handed alpha
Helix 25
25
B
73 88Right-handed alpha
Helix 26
26
B
91 100Right-handed alpha
Helix 27
27
B
101 103Right-handed 310
Helix 28
28
B
106 123Right-handed alpha
Helix 29
29
B
127 142Right-handed alpha
Helix 30
30
B
149 160Right-handed alpha
Helix 31
31
B
164 173Right-handed alpha
Helix 32
32
B
174 176Right-handed 310
Helix 33
33
B
183 204Right-handed alpha
Helix 34
34
B
206 221Right-handed alpha
Helix 35
35
B
229 249Right-handed alpha
Helix 36
36
B
250 267Right-handed alpha
Helix 37
37
B
269 286Right-handed alpha
Helix 38
38
B
292 303Right-handed alpha
Helix 39
39
C
3 15Right-handed alpha
Helix 40
40
C
18 24Right-handed alpha
Helix 41
41
C
28 36Right-handed alpha
Helix 42
42
C
43 55Right-handed alpha
Helix 43
43
C
57 65Right-handed alpha
Helix 44
44
C
73 88Right-handed alpha
Helix 45
45
C
91 100Right-handed alpha
Helix 46
46
C
101 103Right-handed 310
Helix 47
47
C
106 123Right-handed alpha
Helix 48
48
C
127 142Right-handed alpha
Helix 49
49
C
149 160Right-handed alpha
Helix 50
50
C
164 173Right-handed alpha
Helix 51
51
C
174 176Right-handed 310
Helix 52
52
C
183 204Right-handed alpha
Helix 53
53
C
206 221Right-handed alpha
Helix 54
54
C
229 249Right-handed alpha
Helix 55
55
C
250 267Right-handed alpha
Helix 56
56
C
269 286Right-handed alpha
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There are 2 sheets in PDB entry 2GRM. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
313 314first strand
Strand 2
D
4 5parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
313 314first strand
Strand 2
E
4 5parallel
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