Analysis of interatomic Contacts of Structural Units in PDB entry:
2GS7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2GS7 entry

There are 2 chains in PDB entry 2GS7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 679ASP 988
B
 GLN 677TYR 992
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 2GS7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
731 743Right-handed alpha
Helix 2
2
A
773 780Right-handed alpha
Helix 3
3
A
786 807Right-handed alpha
Helix 4
4
A
815 817Right-handed 310
Helix 5
5
A
833 838Right-handed alpha
Helix 6
6
A
853 857Right-handed 310
Helix 7
7
A
858 865Right-handed alpha
Helix 8
8
A
868 885Right-handed alpha
Helix 9
9
A
898 905Right-handed alpha
Helix 10
10
A
916 927Right-handed alpha
Helix 11
11
A
930 934Right-handed 310
Helix 12
12
A
936 948Right-handed alpha
Helix 13
13
A
950 955Right-handed alpha
Helix 14
14
B
731 743Right-handed alpha
Helix 15
15
B
773 781Right-handed alpha
Helix 16
16
B
786 807Right-handed alpha
Helix 17
17
B
815 817Right-handed 310
Helix 18
18
B
833 838Right-handed alpha
Helix 19
19
B
853 857Right-handed 310
Helix 20
20
B
858 865Right-handed alpha
Helix 21
21
B
868 885Right-handed alpha
Helix 22
22
B
895 897Right-handed 310
Helix 23
23
B
898 905Right-handed alpha
Helix 24
24
B
916 927Right-handed alpha
Helix 25
25
B
936 948Right-handed alpha
Helix 26
26
B
950 955Right-handed alpha
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There are 4 sheets in PDB entry 2GS7. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
681 682first strand
Strand 2
A
755 756parallel
Strand 3
A
763 767anti-parallel
Strand 4
A
716 723anti-parallel
Strand 5
A
700 707anti-parallel
Strand 6
A
688 695anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
819 823first strand
Strand 2
A
826 829anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
681 682first strand
Strand 2
B
755 758parallel
Strand 3
B
762 767anti-parallel
Strand 4
B
716 723anti-parallel
Strand 5
B
700 707anti-parallel
Strand 6
B
688 696anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
819 823first strand
Strand 2
B
826 829anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il