Analysis of interatomic Contacts of Structural Units in PDB entry:
2GSJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2GSJ entry

There is 1 chain in PDB entry 2GSJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1VAL 271
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 2GSJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 22Right-handed alpha
Helix 2
2
A
46 50Right-handed 310
Helix 3
3
A
52 56Right-handed 310
Helix 4
4
A
57 58Right-handed 310
Helix 5
5
A
59 69Right-handed alpha
Helix 6
6
A
89 105Right-handed alpha
Helix 7
7
A
132 142Right-handed alpha
Helix 8
8
A
143 146Right-handed 310
Helix 9
9
A
165 171Right-handed alpha
Helix 10
10
A
194 208Right-handed alpha
Helix 11
11
A
219 223Right-handed 310
Helix 12
12
A
229 237Right-handed alpha
Helix 13
13
A
237 242Right-handed alpha
Helix 14
14
A
254 262Right-handed alpha
Helix 15
15
A
262 268Right-handed alpha
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There is 1 sheet ( A) in PDB entry 2GSJ.

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 44first strand
Strand 2
A
27 35anti-parallel
Strand 3
A
73 79parallel
Strand 4
A
121 125parallel
Strand 5
A
151 154parallel
Strand 6
A
176 180parallel
Strand 7
A
211 217parallel
Strand 8
A
247 253parallel
Strand 9
A
2 7parallel
Strand 10
A
27 35parallel
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