Analysis of interatomic Contacts of Structural Units in PDB entry:
2GUL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2GUL entry

There is 1 chain in PDB entry 2GUL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 345
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 2GUL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 25Right-handed alpha
Helix 2
2
A
56 61Right-handed alpha
Helix 3
3
A
71 79Right-handed alpha
Helix 4
4
A
79 85Right-handed alpha
Helix 5
5
A
108 123Right-handed alpha
Helix 6
6
A
134 139Right-handed alpha
Helix 7
7
A
142 151Right-handed alpha
Helix 8
8
A
184 188Right-handed 310
Helix 9
9
A
220 225Right-handed alpha
Helix 10
10
A
225 231Right-handed alpha
Helix 11
11
A
269 281Right-handed alpha
Helix 12
12
A
293 298Right-handed alpha
Helix 13
13
A
331 345Right-handed alpha
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There are 3 sheets in PDB entry 2GUL. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 53first strand
Strand 2
A
31 36parallel
Strand 3
A
2 6parallel
Strand 4
A
65 68parallel
Strand 5
A
90 93parallel
Strand 6
A
126 128parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
245 249first strand
Strand 2
A
177 183parallel
Strand 3
A
255 263anti-parallel
Strand 4
A
314 325anti-parallel
Strand 5
A
304 306anti-parallel
Strand 6
A
285 287parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
245 249first strand
Strand 2
A
177 183parallel
Strand 3
A
255 263anti-parallel
Strand 4
A
314 325anti-parallel
Strand 5
A
310 311anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il