Analysis of interatomic Contacts of Structural Units in PDB entry:
2GUW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2GUW entry

There are 3 chains in PDB entry 2GUW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 8GLU 466
B
 LEU 8ASP 468
C
 LEU 8GLY 467
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 2GUW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 37Right-handed alpha
Helix 2
2
A
43 49Right-handed alpha
Helix 3
3
A
93 109Right-handed alpha
Helix 4
4
A
122 126Right-handed 310
Helix 5
5
A
135 144Right-handed alpha
Helix 6
6
A
175 191Right-handed alpha
Helix 7
7
A
206 223Right-handed alpha
Helix 8
8
A
253 258Right-handed alpha
Helix 9
9
A
281 293Right-handed alpha
Helix 10
10
A
294 296Right-handed 310
Helix 11
11
A
344 360Right-handed alpha
Helix 12
12
A
362 366Right-handed 310
Helix 13
13
A
382 385Right-handed 310
Helix 14
14
A
386 397Right-handed alpha
Helix 15
15
A
405 416Right-handed alpha
Helix 16
16
A
442 447Right-handed alpha
Helix 17
17
A
448 466Right-handed alpha
Helix 18
18
B
9 37Right-handed alpha
Helix 19
19
B
43 50Right-handed alpha
Helix 20
20
B
89 107Right-handed alpha
Helix 21
21
B
123 128Right-handed alpha
Helix 22
22
B
138 146Right-handed alpha
Helix 23
23
B
175 191Right-handed alpha
Helix 24
24
B
193 197Right-handed 310
Helix 25
25
B
206 222Right-handed alpha
Helix 26
26
B
253 258Right-handed alpha
Helix 27
27
B
281 293Right-handed alpha
Helix 28
28
B
294 296Right-handed 310
Helix 29
29
B
344 360Right-handed alpha
Helix 30
30
B
362 369Right-handed alpha
Helix 31
31
B
382 385Right-handed 310
Helix 32
32
B
386 397Right-handed alpha
Helix 33
33
B
405 416Right-handed alpha
Helix 34
34
B
442 447Right-handed alpha
Helix 35
35
B
448 465Right-handed alpha
Helix 36
36
C
11 36Right-handed alpha
Helix 37
37
C
43 51Right-handed alpha
Helix 38
38
C
93 106Right-handed alpha
Helix 39
39
C
122 127Right-handed 310
Helix 40
40
C
139 145Right-handed alpha
Helix 41
41
C
175 190Right-handed alpha
Helix 42
42
C
193 197Right-handed 310
Helix 43
43
C
206 223Right-handed alpha
Helix 44
44
C
253 258Right-handed alpha
Helix 45
45
C
281 293Right-handed alpha
Helix 46
46
C
294 296Right-handed 310
Helix 47
47
C
344 360Right-handed alpha
Helix 48
48
C
364 368Right-handed 310
Helix 49
49
C
382 385Right-handed 310
Helix 50
50
C
386 397Right-handed alpha
Helix 51
51
C
405 416Right-handed alpha
Helix 52
52
C
448 466Right-handed alpha
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There are 7 sheets in PDB entry 2GUW. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 56first strand
Strand 2
A
115 120anti-parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
228 233first strand
Strand 2
A
262 267anti-parallel
Strand 3
A
273 277anti-parallel
Strand 4
A
200 204parallel
Strand 5
A
299 308parallel
Strand 6
A
420 426parallel
Strand 7
A
318 327anti-parallel
Strand 8
A
370 378parallel
Strand 9
A
401 403parallel
Strand 10
A
299 308anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
83 86first strand
Strand 2
B
53 59anti-parallel
Strand 3
B
112 120anti-parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
238 239first strand
Strand 2
B
228 233anti-parallel
Strand 3
B
262 267anti-parallel
Strand 4
B
273 277anti-parallel
Strand 5
B
200 204parallel
Strand 6
B
299 308parallel
Strand 7
B
399 403anti-parallel
Strand 8
B
374 378parallel
Strand 9
B
323 327parallel
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There are 9 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
238 239first strand
Strand 2
B
228 233anti-parallel
Strand 3
B
262 267anti-parallel
Strand 4
B
273 277anti-parallel
Strand 5
B
200 204parallel
Strand 6
B
299 308parallel
Strand 7
B
420 428parallel
Strand 8
B
318 320anti-parallel
Strand 9
B
370 371parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
85 86first strand
Strand 2
C
53 57anti-parallel
Strand 3
C
116 120anti-parallel
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There are 11 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
238 240first strand
Strand 2
C
228 232anti-parallel
Strand 3
C
262 267anti-parallel
Strand 4
C
273 277anti-parallel
Strand 5
C
200 204parallel
Strand 6
C
299 308parallel
Strand 7
C
420 428parallel
Strand 8
C
318 327anti-parallel
Strand 9
C
370 378parallel
Strand 10
C
399 403parallel
Strand 11
C
299 308anti-parallel
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