Analysis of interatomic Contacts of Structural Units in PDB entry:
2GWF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2GWF entry

There are 6 chains in PDB entry 2GWF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 180ALA 315
B
 ASN 197ILE 317
C
 SER 180THR 313
D
 SER 192ILE 317
E
 SER 180LYS 316
F
 TYR 196ILE 317
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 2GWF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
184 194Right-handed alpha
Helix 2
2
A
206 213Right-handed alpha
Helix 3
3
A
222 226Right-handed 310
Helix 4
4
A
231 238Right-handed alpha
Helix 5
5
A
240 249Right-handed alpha
Helix 6
6
A
264 268Right-handed 310
Helix 7
7
A
272 283Right-handed alpha
Helix 8
8
A
299 308Right-handed alpha
Helix 9
9
A
309 312Right-handed 310
Helix 10
10
B
197 206Right-handed alpha
Helix 11
11
B
213 215Right-handed 310
Helix 12
12
B
222 236Right-handed alpha
Helix 13
13
B
239 249Right-handed alpha
Helix 14
14
B
250 255Right-handed 310
Helix 15
15
B
256 260Right-handed 310
Helix 16
16
B
261 273Right-handed alpha
Helix 17
17
B
291 293Right-handed 310
Helix 18
18
C
184 194Right-handed alpha
Helix 19
19
C
206 213Right-handed alpha
Helix 20
20
C
222 226Right-handed 310
Helix 21
21
C
231 238Right-handed alpha
Helix 22
22
C
240 248Right-handed alpha
Helix 23
23
C
264 268Right-handed 310
Helix 24
24
C
272 283Right-handed alpha
Helix 25
25
C
299 308Right-handed alpha
Helix 26
26
C
309 312Right-handed 310
Helix 27
27
D
192 206Right-handed alpha
Helix 28
28
D
213 215Right-handed 310
Helix 29
29
D
222 236Right-handed alpha
Helix 30
30
D
242 249Right-handed alpha
Helix 31
31
D
250 255Right-handed 310
Helix 32
32
D
261 269Right-handed alpha
Helix 33
33
D
270 275Right-handed 310
Helix 34
34
D
291 293Right-handed 310
Helix 35
35
E
184 194Right-handed alpha
Helix 36
36
E
206 213Right-handed alpha
Helix 37
37
E
222 226Right-handed 310
Helix 38
38
E
231 238Right-handed alpha
Helix 39
39
E
240 249Right-handed alpha
Helix 40
40
E
264 268Right-handed 310
Helix 41
41
E
272 283Right-handed alpha
Helix 42
42
E
299 308Right-handed alpha
Helix 43
43
E
309 312Right-handed 310
Helix 44
44
F
196 206Right-handed alpha
Helix 45
45
F
213 215Right-handed 310
Helix 46
46
F
222 236Right-handed alpha
Helix 47
47
F
239 249Right-handed alpha
Helix 48
48
F
250 255Right-handed 310
Helix 49
49
F
261 269Right-handed alpha
Helix 50
50
F
270 275Right-handed 310
Helix 51
51
F
291 293Right-handed 310
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There are 9 sheets in PDB entry 2GWF. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 183first strand
Strand 2
A
295 297parallel
Strand 3
A
255 259parallel
Strand 4
A
199 203parallel
Strand 5
A
219 220parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
209 211first strand
Strand 2
B
314 316anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
217 218first strand
Strand 2
B
305 310anti-parallel
Strand 3
B
285 289anti-parallel
Strand 4
B
278 279anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
182 183first strand
Strand 2
C
295 297parallel
Strand 3
C
255 259parallel
Strand 4
C
199 203parallel
Strand 5
C
219 220parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
209 211first strand
Strand 2
D
314 316anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
217 218first strand
Strand 2
D
305 310anti-parallel
Strand 3
D
285 289anti-parallel
Strand 4
D
278 279anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
182 183first strand
Strand 2
E
295 297parallel
Strand 3
E
255 259parallel
Strand 4
E
199 203parallel
Strand 5
E
219 220parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
209 211first strand
Strand 2
F
314 316anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
217 218first strand
Strand 2
F
305 310anti-parallel
Strand 3
F
285 289anti-parallel
Strand 4
F
277 279anti-parallel
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