Analysis of interatomic Contacts of Structural Units in PDB entry:
2GWG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2GWG entry

There are 2 chains in PDB entry 2GWG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1HIS 345
B
 MSE 1HIS 345
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 44 helices in PDB entry 2GWG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 29Right-handed alpha
Helix 2
2
A
30 33Right-handed 310
Helix 3
3
A
35 39Right-handed 310
Helix 4
4
A
42 52Right-handed alpha
Helix 5
5
A
53 62Right-handed alpha
Helix 6
6
A
81 103Right-handed alpha
Helix 7
7
A
120 123Right-handed 310
Helix 8
8
A
124 134Right-handed alpha
Helix 9
9
A
158 160Right-handed 310
Helix 10
10
A
161 172Right-handed alpha
Helix 11
11
A
192 208Right-handed alpha
Helix 12
12
A
209 214Right-handed alpha
Helix 13
13
A
222 226Right-handed 310
Helix 14
14
A
228 230Right-handed 310
Helix 15
15
A
231 242Right-handed alpha
Helix 16
16
A
246 251Right-handed alpha
Helix 17
17
A
263 274Right-handed alpha
Helix 18
18
A
275 277Right-handed 310
Helix 19
19
A
303 310Right-handed alpha
Helix 20
20
A
314 323Right-handed alpha
Helix 21
21
A
323 330Right-handed alpha
Helix 22
22
A
330 344Right-handed alpha
Helix 23
23
B
13 29Right-handed alpha
Helix 24
24
B
30 33Right-handed 310
Helix 25
25
B
35 39Right-handed 310
Helix 26
26
B
42 52Right-handed alpha
Helix 27
27
B
53 62Right-handed alpha
Helix 28
28
B
81 103Right-handed alpha
Helix 29
29
B
120 123Right-handed 310
Helix 30
30
B
124 134Right-handed alpha
Helix 31
31
B
158 160Right-handed 310
Helix 32
32
B
161 172Right-handed alpha
Helix 33
33
B
192 208Right-handed alpha
Helix 34
34
B
209 214Right-handed alpha
Helix 35
35
B
222 226Right-handed 310
Helix 36
36
B
228 230Right-handed 310
Helix 37
37
B
231 242Right-handed alpha
Helix 38
38
B
246 251Right-handed alpha
Helix 39
39
B
263 274Right-handed alpha
Helix 40
40
B
275 277Right-handed 310
Helix 41
41
B
303 310Right-handed alpha
Helix 42
42
B
314 323Right-handed alpha
Helix 43
43
B
323 330Right-handed alpha
Helix 44
44
B
330 345Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 2GWG. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 8first strand
Strand 2
A
65 69parallel
Strand 3
A
107 112parallel
Strand 4
A
139 142parallel
Strand 5
A
175 177parallel
Strand 6
A
219 221parallel
Strand 7
A
255 258parallel
Strand 8
A
279 280parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 8first strand
Strand 2
B
65 69parallel
Strand 3
B
107 109parallel
Back to list of sheets
Back to top of page

There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
111 112first strand
Strand 2
B
140 142parallel
Strand 3
B
175 177parallel
Strand 4
B
219 221parallel
Strand 5
B
255 258parallel
Strand 6
B
279 280parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il