Analysis of interatomic Contacts of Structural Units in PDB entry:
2GWR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2GWR entry

There is 1 chain in PDB entry 2GWR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2PRO 228
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 2GWR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 28Right-handed alpha
Helix 2
2
A
37 39Right-handed 310
Helix 3
3
A
40 49Right-handed alpha
Helix 4
4
A
63 73Right-handed alpha
Helix 5
5
A
90 97Right-handed alpha
Helix 6
6
A
108 120Right-handed alpha
Helix 7
7
A
155 168Right-handed alpha
Helix 8
8
A
174 182Right-handed alpha
Helix 9
9
A
191 206Right-handed alpha
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There are 3 sheets in PDB entry 2GWR. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 35first strand
Strand 2
A
7 11parallel
Strand 3
A
52 56parallel
Strand 4
A
79 84parallel
Strand 5
A
101 105parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 133first strand
Strand 2
A
136 139anti-parallel
Strand 3
A
144 147anti-parallel
Strand 4
A
150 152anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
215 218first strand
Strand 2
A
222 225anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il