Analysis of interatomic Contacts of Structural Units in PDB entry:
2GWS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2GWS entry

There are 16 chains in PDB entry 2GWS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
T
 C 1 C 11
P
 G 1 G 6
D
 G 1 G 4
F
 C 1 C 11
G
 G 1 G 6
H
 G 1 G 4
J
 C 1 C 11
K
 G 1 G 6
L
 G 1 G 4
N
 C 1 C 11
R
 G 1 G 6
Q
 G 1 G 4
A
 ALA 249TRP 575
E
 THR 250TRP 575
I
 THR 250TRP 575
M
 THR 250TRP 575
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 71 helices in PDB entry 2GWS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
253 270Right-handed alpha
Helix 2
2
A
272 288Right-handed alpha
Helix 3
3
A
295 302Right-handed alpha
Helix 4
4
A
306 320Right-handed alpha
Helix 5
5
A
322 328Right-handed 310
Helix 6
6
A
331 340Right-handed alpha
Helix 7
7
A
345 355Right-handed alpha
Helix 8
8
A
359 367Right-handed alpha
Helix 9
9
A
370 379Right-handed alpha
Helix 10
10
A
379 385Right-handed alpha
Helix 11
11
A
389 405Right-handed alpha
Helix 12
12
A
415 420Right-handed alpha
Helix 13
13
A
443 454Right-handed alpha
Helix 14
14
A
495 497Right-handed 310
Helix 15
15
A
498 508Right-handed alpha
Helix 16
16
A
509 523Right-handed alpha
Helix 17
17
A
555 563Right-handed alpha
Helix 18
18
A
569 573Right-handed 310
Helix 19
19
E
253 270Right-handed alpha
Helix 20
20
E
272 288Right-handed alpha
Helix 21
21
E
295 301Right-handed alpha
Helix 22
22
E
306 320Right-handed alpha
Helix 23
23
E
330 340Right-handed alpha
Helix 24
24
E
345 355Right-handed alpha
Helix 25
25
E
359 367Right-handed alpha
Helix 26
26
E
370 379Right-handed alpha
Helix 27
27
E
381 385Right-handed 310
Helix 28
28
E
389 405Right-handed alpha
Helix 29
29
E
415 420Right-handed alpha
Helix 30
30
E
443 454Right-handed alpha
Helix 31
31
E
495 497Right-handed 310
Helix 32
32
E
498 508Right-handed alpha
Helix 33
33
E
509 523Right-handed alpha
Helix 34
34
E
555 564Right-handed alpha
Helix 35
35
E
569 573Right-handed 310
Helix 36
36
I
253 270Right-handed alpha
Helix 37
37
I
272 288Right-handed alpha
Helix 38
38
I
295 302Right-handed alpha
Helix 39
39
I
306 318Right-handed alpha
Helix 40
40
I
322 327Right-handed 310
Helix 41
41
I
331 340Right-handed alpha
Helix 42
42
I
345 355Right-handed alpha
Helix 43
43
I
359 366Right-handed alpha
Helix 44
44
I
370 379Right-handed alpha
Helix 45
45
I
379 385Right-handed alpha
Helix 46
46
I
389 407Right-handed alpha
Helix 47
47
I
415 420Right-handed alpha
Helix 48
48
I
442 454Right-handed alpha
Helix 49
49
I
495 497Right-handed 310
Helix 50
50
I
498 508Right-handed alpha
Helix 51
51
I
509 523Right-handed alpha
Helix 52
52
I
555 563Right-handed alpha
Helix 53
53
I
569 573Right-handed 310
Helix 54
54
M
253 271Right-handed alpha
Helix 55
55
M
272 289Right-handed alpha
Helix 56
56
M
295 302Right-handed alpha
Helix 57
57
M
306 320Right-handed alpha
Helix 58
58
M
322 328Right-handed 310
Helix 59
59
M
331 340Right-handed alpha
Helix 60
60
M
345 355Right-handed alpha
Helix 61
61
M
359 367Right-handed alpha
Helix 62
62
M
370 379Right-handed alpha
Helix 63
63
M
379 385Right-handed alpha
Helix 64
64
M
389 405Right-handed alpha
Helix 65
65
M
415 420Right-handed alpha
Helix 66
66
M
443 454Right-handed alpha
Helix 67
67
M
495 497Right-handed 310
Helix 68
68
M
498 508Right-handed alpha
Helix 69
69
M
509 523Right-handed alpha
Helix 70
70
M
555 563Right-handed alpha
Helix 71
71
M
569 573Right-handed 310
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There are 15 sheets in PDB entry 2GWS. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
387 388first strand
Strand 2
A
424 425anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
411 414first strand
Strand 2
A
428 433anti-parallel
Strand 3
A
487 493parallel
Strand 4
A
470 477anti-parallel
Strand 5
A
457 467anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
525 527first strand
Strand 2
A
532 534anti-parallel
Strand 3
A
550 551anti-parallel
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There are 1 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
537 538first strand
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
387 388first strand
Strand 2
E
424 425anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
411 414first strand
Strand 2
E
428 433anti-parallel
Strand 3
E
487 493parallel
Strand 4
E
470 477anti-parallel
Strand 5
E
457 467anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
525 527first strand
Strand 2
E
532 534anti-parallel
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There are 1 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
537 538first strand
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
387 388first strand
Strand 2
I
424 425anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
411 414first strand
Strand 2
I
428 433anti-parallel
Strand 3
I
487 493parallel
Strand 4
I
470 477anti-parallel
Strand 5
I
457 467anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
525 527first strand
Strand 2
I
532 534anti-parallel
Strand 3
I
550 551anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
387 388first strand
Strand 2
M
424 425anti-parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
411 414first strand
Strand 2
M
428 433anti-parallel
Strand 3
M
487 493parallel
Strand 4
M
470 477anti-parallel
Strand 5
M
457 467anti-parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
525 527first strand
Strand 2
M
532 534anti-parallel
Strand 3
M
550 551anti-parallel
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There are 1 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
537 538first strand
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