Analysis of interatomic Contacts of Structural Units in PDB entry:
2GZ6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2GZ6 entry

There are 2 chains in PDB entry 2GZ6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3SER 388
B
 ASN 4SER 388
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 2GZ6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 19Right-handed alpha
Helix 2
2
A
19 28Right-handed alpha
Helix 3
3
A
52 69Right-handed alpha
Helix 4
4
A
72 90Right-handed alpha
Helix 5
5
A
113 132Right-handed alpha
Helix 6
6
A
133 149Right-handed alpha
Helix 7
7
A
171 184Right-handed alpha
Helix 8
8
A
185 188Right-handed 310
Helix 9
9
A
189 207Right-handed alpha
Helix 10
10
A
236 254Right-handed alpha
Helix 11
11
A
256 275Right-handed alpha
Helix 12
12
A
303 321Right-handed alpha
Helix 13
13
A
322 341Right-handed alpha
Helix 14
14
A
371 388Right-handed alpha
Helix 15
15
B
4 19Right-handed alpha
Helix 16
16
B
19 28Right-handed alpha
Helix 17
17
B
52 69Right-handed alpha
Helix 18
18
B
72 90Right-handed alpha
Helix 19
19
B
114 132Right-handed alpha
Helix 20
20
B
133 151Right-handed alpha
Helix 21
21
B
171 184Right-handed alpha
Helix 22
22
B
185 188Right-handed 310
Helix 23
23
B
189 207Right-handed alpha
Helix 24
24
B
236 253Right-handed alpha
Helix 25
25
B
256 275Right-handed alpha
Helix 26
26
B
303 321Right-handed alpha
Helix 27
27
B
322 341Right-handed alpha
Helix 28
28
B
371 388Right-handed alpha
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There are 12 sheets in PDB entry 2GZ6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 39first strand
Strand 2
A
45 47anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 51first strand
Strand 2
A
100 101anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 170first strand
Strand 2
A
219 220anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
209 210first strand
Strand 2
A
215 216anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
234 235first strand
Strand 2
A
286 287anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 302first strand
Strand 2
A
351 352anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 39first strand
Strand 2
B
45 47anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
50 51first strand
Strand 2
B
100 101anti-parallel
Strand 3
B
107 108anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
169 170first strand
Strand 2
B
219 220anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
209 210first strand
Strand 2
B
215 216anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
234 235first strand
Strand 2
B
286 287anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
301 302first strand
Strand 2
B
351 352anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il