Analysis of interatomic Contacts of Structural Units in PDB entry:
2H0V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2H0V entry

There are 2 chains in PDB entry 2H0V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 3PRO 337
B
 THR 3PRO 337
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 2H0V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
38 43Right-handed alpha
Helix 2
2
A
125 131Right-handed alpha
Helix 3
3
A
148 157Right-handed alpha
Helix 4
4
A
210 214Right-handed 310
Helix 5
5
A
297 303Right-handed alpha
Helix 6
6
A
320 327Right-handed alpha
Helix 7
7
A
328 330Right-handed 310
Helix 8
8
B
38 43Right-handed alpha
Helix 9
9
B
123 125Right-handed 310
Helix 10
10
B
126 131Right-handed alpha
Helix 11
11
B
148 159Right-handed alpha
Helix 12
12
B
210 214Right-handed 310
Helix 13
13
B
297 303Right-handed alpha
Helix 14
14
B
320 327Right-handed alpha
Helix 15
15
B
328 330Right-handed 310
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There are 8 sheets in PDB entry 2H0V. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 18first strand
Strand 2
A
266 269anti-parallel
Strand 3
A
240 247anti-parallel
Strand 4
A
284 291anti-parallel
Strand 5
A
219 225anti-parallel
Strand 6
A
203 209anti-parallel
Strand 7
A
196 200anti-parallel
Strand 8
A
304 305anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 133first strand
Strand 2
A
24 28anti-parallel
Strand 3
A
31 37anti-parallel
Strand 4
A
46 53anti-parallel
Strand 5
A
112 119anti-parallel
Strand 6
A
69 75anti-parallel
Strand 7
A
94 97anti-parallel
Strand 8
A
188 190anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 163first strand
Strand 2
A
58 63anti-parallel
Strand 3
A
103 107anti-parallel
Strand 4
A
78 82anti-parallel
Strand 5
A
85 89anti-parallel
Strand 6
A
174 175parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
257 261first strand
Strand 2
A
250 254anti-parallel
Strand 3
A
275 279anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 18first strand
Strand 2
B
266 269anti-parallel
Strand 3
B
240 247anti-parallel
Strand 4
B
284 291anti-parallel
Strand 5
B
219 225anti-parallel
Strand 6
B
203 209anti-parallel
Strand 7
B
196 200anti-parallel
Strand 8
B
304 305anti-parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
132 133first strand
Strand 2
B
24 28anti-parallel
Strand 3
B
31 37anti-parallel
Strand 4
B
46 53anti-parallel
Strand 5
B
112 119anti-parallel
Strand 6
B
69 75anti-parallel
Strand 7
B
94 97anti-parallel
Strand 8
B
188 190anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
162 163first strand
Strand 2
B
58 63anti-parallel
Strand 3
B
103 107anti-parallel
Strand 4
B
78 82anti-parallel
Strand 5
B
85 89anti-parallel
Strand 6
B
174 175parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
257 261first strand
Strand 2
B
250 254anti-parallel
Strand 3
B
275 279anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il