Analysis of interatomic Contacts of Structural Units in PDB entry:
2H16


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2H16 entry

There are 4 chains in PDB entry 2H16 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 15LYS 177
B
 GLN 15LEU 176
C
 GLN 15LEU 176
D
 GLN 15LEU 176
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 2H16. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
28 37Right-handed alpha
Helix 2
2
A
98 111Right-handed alpha
Helix 3
3
A
112 116Right-handed 310
Helix 4
4
A
134 143Right-handed alpha
Helix 5
5
A
144 147Right-handed 310
Helix 6
6
A
164 175Right-handed alpha
Helix 7
7
B
28 37Right-handed alpha
Helix 8
8
B
98 112Right-handed alpha
Helix 9
9
B
113 116Right-handed 310
Helix 10
10
B
134 142Right-handed alpha
Helix 11
11
B
143 147Right-handed 310
Helix 12
12
B
164 175Right-handed alpha
Helix 13
13
C
28 37Right-handed alpha
Helix 14
14
C
98 111Right-handed alpha
Helix 15
15
C
112 116Right-handed 310
Helix 16
16
C
134 142Right-handed alpha
Helix 17
17
C
143 147Right-handed 310
Helix 18
18
C
164 175Right-handed alpha
Helix 19
19
D
28 39Right-handed alpha
Helix 20
20
D
98 111Right-handed alpha
Helix 21
21
D
112 116Right-handed 310
Helix 22
22
D
134 142Right-handed alpha
Helix 23
23
D
143 147Right-handed 310
Helix 24
24
D
164 175Right-handed alpha
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There are 4 sheets in PDB entry 2H16. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 57first strand
Strand 2
A
60 66anti-parallel
Strand 3
A
16 22parallel
Strand 4
A
86 92parallel
Strand 5
A
119 125parallel
Strand 6
A
152 156parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 57first strand
Strand 2
B
60 66anti-parallel
Strand 3
B
16 22parallel
Strand 4
B
84 92parallel
Strand 5
B
119 125parallel
Strand 6
B
152 156parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
52 57first strand
Strand 2
C
60 66anti-parallel
Strand 3
C
16 22parallel
Strand 4
C
86 92parallel
Strand 5
C
119 125parallel
Strand 6
C
152 156parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
52 57first strand
Strand 2
D
60 66anti-parallel
Strand 3
D
16 22parallel
Strand 4
D
86 92parallel
Strand 5
D
119 125parallel
Strand 6
D
152 156parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il