Analysis of interatomic Contacts of Structural Units in PDB entry:
2H1T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2H1T entry

There are 2 chains in PDB entry 2H1T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2LEU 187
B
 ASP 4LEU 187
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 2H1T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
93 97Right-handed 310
Helix 2
2
A
107 110Right-handed 310
Helix 3
3
A
111 119Right-handed alpha
Helix 4
4
B
93 97Right-handed 310
Helix 5
5
B
107 110Right-handed 310
Helix 6
6
B
111 119Right-handed alpha
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There are 3 sheets in PDB entry 2H1T. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 14 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
85 87first strand
Strand 2
B
71 79anti-parallel
Strand 3
B
59 68anti-parallel
Strand 4
B
44 53anti-parallel
Strand 5
B
29 37anti-parallel
Strand 6
B
20 25anti-parallel
Strand 7
A
5 11anti-parallel
Strand 8
B
184 186anti-parallel
Strand 9
B
177 180anti-parallel
Strand 10
B
166 171anti-parallel
Strand 11
B
154 159anti-parallel
Strand 12
B
141 151anti-parallel
Strand 13
B
125 134anti-parallel
Strand 14
B
101 105parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 17first strand
Strand 2
B
15 17anti-parallel
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There are 14 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 87first strand
Strand 2
A
71 79anti-parallel
Strand 3
A
59 68anti-parallel
Strand 4
A
44 53anti-parallel
Strand 5
A
29 37anti-parallel
Strand 6
A
20 25anti-parallel
Strand 7
B
5 11anti-parallel
Strand 8
A
184 186anti-parallel
Strand 9
A
177 180anti-parallel
Strand 10
A
166 171anti-parallel
Strand 11
A
154 159anti-parallel
Strand 12
A
141 151anti-parallel
Strand 13
A
125 134anti-parallel
Strand 14
A
101 105parallel
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