Analysis of interatomic Contacts of Structural Units in PDB entry:
2H2W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2H2W entry

There is 1 chain in PDB entry 2H2W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2THR 296
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 2H2W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 17Right-handed alpha
Helix 2
2
A
46 60Right-handed alpha
Helix 3
3
A
81 89Right-handed alpha
Helix 4
4
A
91 95Right-handed 310
Helix 5
5
A
114 118Right-handed 310
Helix 6
6
A
120 134Right-handed alpha
Helix 7
7
A
142 154Right-handed alpha
Helix 8
8
A
176 180Right-handed 310
Helix 9
9
A
197 202Right-handed alpha
Helix 10
10
A
240 252Right-handed alpha
Helix 11
11
A
263 267Right-handed 310
Helix 12
12
A
276 291Right-handed alpha
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There is 1 sheet ( A) in PDB entry 2H2W.

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 4first strand
Strand 2
A
65 70parallel
Strand 3
A
36 41parallel
Strand 4
A
100 105parallel
Strand 5
A
135 141parallel
Strand 6
A
228 231parallel
Strand 7
A
217 223anti-parallel
Strand 8
A
207 213anti-parallel
Strand 9
A
158 172anti-parallel
Strand 10
A
185 195anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il