Analysis of interatomic Contacts of Structural Units in PDB entry:
2H34


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2H34 entry

There are 2 chains in PDB entry 2H34 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 14ALA 276
B
 GLY 14ALA 276
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 25 helices in PDB entry 2H34. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
48 53Right-handed 310
Helix 2
2
A
54 69Right-handed alpha
Helix 3
3
A
101 109Right-handed alpha
Helix 4
4
A
112 133Right-handed alpha
Helix 5
5
A
141 143Right-handed 310
Helix 6
6
A
178 182Right-handed 310
Helix 7
7
A
183 187Right-handed 310
Helix 8
8
A
196 211Right-handed alpha
Helix 9
9
A
218 229Right-handed alpha
Helix 10
10
A
233 237Right-handed 310
Helix 11
11
A
243 253Right-handed alpha
Helix 12
12
A
256 260Right-handed 310
Helix 13
13
A
263 274Right-handed alpha
Helix 14
14
B
54 71Right-handed alpha
Helix 15
15
B
101 108Right-handed alpha
Helix 16
16
B
112 133Right-handed alpha
Helix 17
17
B
141 143Right-handed 310
Helix 18
18
B
149 151Right-handed 310
Helix 19
19
B
183 188Right-handed 310
Helix 20
20
B
195 211Right-handed alpha
Helix 21
21
B
218 228Right-handed alpha
Helix 22
22
B
233 237Right-handed 310
Helix 23
23
B
244 253Right-handed alpha
Helix 24
24
B
256 260Right-handed 310
Helix 25
25
B
263 275Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 2H34. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 24first strand
Strand 2
A
29 35anti-parallel
Strand 3
A
40 46anti-parallel
Strand 4
A
88 94anti-parallel
Strand 5
A
79 85anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 100first strand
Strand 2
A
145 147anti-parallel
Strand 3
A
153 155anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 24first strand
Strand 2
B
29 35anti-parallel
Strand 3
B
40 47anti-parallel
Strand 4
B
88 93anti-parallel
Strand 5
B
79 85anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
99 100first strand
Strand 2
B
145 147anti-parallel
Strand 3
B
153 155anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il