Analysis of interatomic Contacts of Structural Units in PDB entry:
2H4D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2H4D entry

There is 1 chain in PDB entry 2H4D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASP 522
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 29 helices in PDB entry 2H4D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 19Right-handed alpha
Helix 2
2
A
21 27Right-handed alpha
Helix 3
3
A
41 49Right-handed alpha
Helix 4
4
A
52 70Right-handed alpha
Helix 5
5
A
70 84Right-handed alpha
Helix 6
6
A
88 101Right-handed alpha
Helix 7
7
A
124 136Right-handed alpha
Helix 8
8
A
145 162Right-handed alpha
Helix 9
9
A
165 177Right-handed alpha
Helix 10
10
A
182 199Right-handed alpha
Helix 11
11
A
203 206Right-handed 310
Helix 12
12
A
207 218Right-handed alpha
Helix 13
13
A
226 240Right-handed alpha
Helix 14
14
A
243 248Right-handed alpha
Helix 15
15
A
249 265Right-handed alpha
Helix 16
16
A
268 286Right-handed alpha
Helix 17
17
A
290 295Right-handed alpha
Helix 18
18
A
301 312Right-handed alpha
Helix 19
19
A
321 352Right-handed alpha
Helix 20
20
A
353 359Right-handed alpha
Helix 21
21
A
359 367Right-handed alpha
Helix 22
22
A
376 390Right-handed alpha
Helix 23
23
A
392 417Right-handed alpha
Helix 24
24
A
426 439Right-handed alpha
Helix 25
25
A
456 463Right-handed alpha
Helix 26
26
A
463 468Right-handed alpha
Helix 27
27
A
469 490Right-handed alpha
Helix 28
28
A
494 508Right-handed alpha
Helix 29
29
A
509 516Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 2H4D.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 20first strand
Strand 2
A
121 123parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il