Analysis of interatomic Contacts of Structural Units in PDB entry:
2H4R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2H4R entry

There is 1 chain in PDB entry 2H4R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU -2GLU 410
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 2H4R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
-1 21Right-handed alpha
Helix 2
2
A
31 44Right-handed alpha
Helix 3
3
A
47 58Right-handed alpha
Helix 4
4
A
91 106Right-handed alpha
Helix 5
5
A
129 141Right-handed alpha
Helix 6
6
A
152 168Right-handed alpha
Helix 7
7
A
177 181Right-handed 310
Helix 8
8
A
204 208Right-handed 310
Helix 9
9
A
250 252Right-handed 310
Helix 10
10
A
271 276Right-handed alpha
Helix 11
11
A
279 288Right-handed alpha
Helix 12
12
A
312 319Right-handed alpha
Helix 13
13
A
322 326Right-handed 310
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There are 4 sheets in PDB entry 2H4R. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 30first strand
Strand 2
A
398 405anti-parallel
Strand 3
A
387 393anti-parallel
Strand 4
A
254 261anti-parallel
Strand 5
A
242 248anti-parallel
Strand 6
A
220 237anti-parallel
Strand 7
A
209 214anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 30first strand
Strand 2
A
398 405anti-parallel
Strand 3
A
387 393anti-parallel
Strand 4
A
254 261anti-parallel
Strand 5
A
242 248anti-parallel
Strand 6
A
220 237anti-parallel
Strand 7
A
293 302anti-parallel
Strand 8
A
379 382parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 147first strand
Strand 2
A
113 123parallel
Strand 3
A
187 196anti-parallel
Strand 4
A
344 353parallel
Strand 5
A
304 306anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 147first strand
Strand 2
A
113 123parallel
Strand 3
A
187 196anti-parallel
Strand 4
A
344 353parallel
Strand 5
A
309 311anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il