Analysis of interatomic Contacts of Structural Units in PDB entry:
2H5G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2H5G entry

There are 2 chains in PDB entry 2H5G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 361ASN 793
B
 THR 362THR 794
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 2H5G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
362 380Right-handed alpha
Helix 2
2
A
381 399Right-handed alpha
Helix 3
3
A
399 415Right-handed alpha
Helix 4
4
A
419 425Right-handed alpha
Helix 5
5
A
429 447Right-handed alpha
Helix 6
6
A
485 498Right-handed alpha
Helix 7
7
A
506 508Right-handed 310
Helix 8
8
A
509 526Right-handed alpha
Helix 9
9
A
527 528Right-handed 310
Helix 10
10
A
529 531Right-handed 310
Helix 11
11
A
560 571Right-handed alpha
Helix 12
12
A
596 607Right-handed alpha
Helix 13
13
A
623 625Right-handed 310
Helix 14
14
A
627 640Right-handed alpha
Helix 15
15
A
647 652Right-handed alpha
Helix 16
16
A
680 692Right-handed alpha
Helix 17
17
A
703 714Right-handed alpha
Helix 18
18
A
724 728Right-handed 310
Helix 19
19
A
753 756Right-handed 310
Helix 20
20
A
770 775Right-handed 310
Helix 21
21
B
362 380Right-handed alpha
Helix 22
22
B
381 399Right-handed alpha
Helix 23
23
B
399 415Right-handed alpha
Helix 24
24
B
419 425Right-handed alpha
Helix 25
25
B
429 447Right-handed alpha
Helix 26
26
B
485 498Right-handed alpha
Helix 27
27
B
506 508Right-handed 310
Helix 28
28
B
509 525Right-handed alpha
Helix 29
29
B
526 528Right-handed 310
Helix 30
30
B
529 531Right-handed 310
Helix 31
31
B
560 571Right-handed alpha
Helix 32
32
B
596 607Right-handed alpha
Helix 33
33
B
623 625Right-handed 310
Helix 34
34
B
627 640Right-handed alpha
Helix 35
35
B
647 653Right-handed alpha
Helix 36
36
B
680 692Right-handed alpha
Helix 37
37
B
703 714Right-handed alpha
Helix 38
38
B
724 728Right-handed 310
Helix 39
39
B
753 756Right-handed 310
Helix 40
40
B
770 775Right-handed 310
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There are 8 sheets in PDB entry 2H5G. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
758 765first strand
Strand 2
A
464 472anti-parallel
Strand 3
A
454 461anti-parallel
Strand 4
A
785 786anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
533 535first strand
Strand 2
A
500 504parallel
Strand 3
A
475 480parallel
Strand 4
A
554 558parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
643 646first strand
Strand 2
A
672 678parallel
Strand 3
A
615 621parallel
Strand 4
A
584 588parallel
Strand 5
A
696 700parallel
Strand 6
A
718 721parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
741 742first strand
Strand 2
A
750 751anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
758 765first strand
Strand 2
B
464 472anti-parallel
Strand 3
B
454 461anti-parallel
Strand 4
B
785 786anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
533 535first strand
Strand 2
B
500 504parallel
Strand 3
B
475 480parallel
Strand 4
B
554 558parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
643 646first strand
Strand 2
B
672 678parallel
Strand 3
B
615 621parallel
Strand 4
B
584 588parallel
Strand 5
B
696 700parallel
Strand 6
B
718 721parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
740 742first strand
Strand 2
B
750 752anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il