Analysis of interatomic Contacts of Structural Units in PDB entry:
2H5T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2H5T entry

There is 1 chain in PDB entry 2H5T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LYS 678TYR 897
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 11 helices in PDB entry 2H5T. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
681 689Right-handed alpha
Helix 2
2
A
694 702Right-handed alpha
Helix 3
3
A
713 721Right-handed alpha
Helix 4
4
A
721 736Right-handed alpha
Helix 5
5
A
740 752Right-handed alpha
Helix 6
6
A
753 764Right-handed alpha
Helix 7
7
A
765 769Right-handed 310
Helix 8
8
A
778 797Right-handed alpha
Helix 9
9
A
800 822Right-handed alpha
Helix 10
10
A
830 842Right-handed alpha
Helix 11
11
A
878 897Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 2H5T.

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
846 853first strand
Strand 2
A
860 867anti-parallel
Strand 3
A
870 876anti-parallel
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il