Analysis of interatomic Contacts of Structural Units in PDB entry:
2H6T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2H6T entry

There are 3 chains in PDB entry 2H6T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 1THR 342
B
 VAL 2VAL 3
B
 ALA 5ALA 5
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 2H6T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
57 61Right-handed 310
Helix 2
2
A
66 70Right-handed 310
Helix 3
3
A
132 136Right-handed 310
Helix 4
4
A
139 147Right-handed alpha
Helix 5
5
A
227 238Right-handed alpha
Helix 6
6
A
307 312Right-handed alpha
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There are 5 sheets in PDB entry 2H6T. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 83first strand
Strand 2
A
89 101anti-parallel
Strand 3
A
14 20anti-parallel
Strand 4
A
3 9anti-parallel
Strand 5
A
166 171anti-parallel
Strand 6
A
154 158anti-parallel
Strand 7
A
314 319anti-parallel
Strand 8
A
324 330anti-parallel
Strand 9
A
179 187anti-parallel
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There are 13 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 83first strand
Strand 2
A
89 101anti-parallel
Strand 3
A
104 117anti-parallel
Strand 4
A
38 47parallel
Strand 5
A
123 125anti-parallel
Strand 6
A
25 32parallel
Strand 7
A
14 20anti-parallel
Strand 8
A
3 9anti-parallel
Strand 9
A
166 171anti-parallel
Strand 10
A
154 158anti-parallel
Strand 11
A
314 319anti-parallel
Strand 12
A
324 330anti-parallel
Strand 13
A
179 187anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
173 175first strand
Strand 2
A
338 340anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
271 275first strand
Strand 2
A
261 266anti-parallel
Strand 3
A
195 203anti-parallel
Strand 4
A
206 217anti-parallel
Strand 5
A
305 306parallel
Strand 6
A
224 226anti-parallel
Strand 7
A
298 300parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
241 244first strand
Strand 2
A
250 254anti-parallel
Strand 3
A
290 296anti-parallel
Strand 4
A
280 284anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il