Analysis of interatomic Contacts of Structural Units in PDB entry:
2H7D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2H7D entry

There are 3 chains in PDB entry 2H7D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 305SER 405
B
 LYS 716VAL 740
B
 SER 742ARG 749
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 2 helices in PDB entry 2H7D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
384 403Right-handed alpha
Helix 2
2
B
721 736Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 2H7D.

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 352first strand
Strand 2
A
336 340anti-parallel
Strand 3
A
325 332anti-parallel
Strand 4
A
311 318anti-parallel
Strand 5
A
378 382anti-parallel
Strand 6
A
365 370anti-parallel
Strand 7
A
356 361anti-parallel
Strand 8
B
739 741anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il