Analysis of interatomic Contacts of Structural Units in PDB entry:
2H8K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2H8K entry

There are 2 chains in PDB entry 2H8K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 18THR 302
B
 PHE 18THR 302
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 2H8K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
31 40Right-handed alpha
Helix 2
2
A
58 71Right-handed alpha
Helix 3
3
A
119 123Right-handed 310
Helix 4
4
A
124 130Right-handed alpha
Helix 5
5
A
140 153Right-handed alpha
Helix 6
6
A
163 174Right-handed alpha
Helix 7
7
A
180 192Right-handed alpha
Helix 8
8
A
202 208Right-handed alpha
Helix 9
9
A
208 221Right-handed alpha
Helix 10
10
A
226 236Right-handed alpha
Helix 11
11
A
237 243Right-handed alpha
Helix 12
12
A
271 276Right-handed 310
Helix 13
13
A
278 293Right-handed alpha
Helix 14
14
B
31 40Right-handed alpha
Helix 15
15
B
58 71Right-handed alpha
Helix 16
16
B
119 123Right-handed 310
Helix 17
17
B
124 130Right-handed alpha
Helix 18
18
B
140 153Right-handed alpha
Helix 19
19
B
163 174Right-handed alpha
Helix 20
20
B
180 192Right-handed alpha
Helix 21
21
B
202 208Right-handed alpha
Helix 22
22
B
208 221Right-handed alpha
Helix 23
23
B
226 236Right-handed alpha
Helix 24
24
B
237 243Right-handed alpha
Helix 25
25
B
271 276Right-handed 310
Helix 26
26
B
278 293Right-handed alpha
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There are 4 sheets in PDB entry 2H8K. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 23first strand
Strand 2
A
28 30anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 116first strand
Strand 2
A
49 53parallel
Strand 3
A
133 138parallel
Strand 4
A
197 201parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
21 23first strand
Strand 2
B
28 30anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
113 116first strand
Strand 2
B
49 53parallel
Strand 3
B
133 138parallel
Strand 4
B
197 201parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il