Analysis of interatomic Contacts of Structural Units in PDB entry:
2H8O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2H8O entry

There is 1 chain in PDB entry 2H8O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 33GLU 332
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 15 helices in PDB entry 2H8O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
33 58Right-handed alpha
Helix 2
2
A
70 83Right-handed alpha
Helix 3
3
A
87 100Right-handed alpha
Helix 4
4
A
103 126Right-handed alpha
Helix 5
5
A
141 146Right-handed alpha
Helix 6
6
A
147 168Right-handed alpha
Helix 7
7
A
174 190Right-handed alpha
Helix 8
8
A
193 207Right-handed alpha
Helix 9
9
A
210 222Right-handed alpha
Helix 10
10
A
222 238Right-handed alpha
Helix 11
11
A
240 268Right-handed alpha
Helix 12
12
A
288 294Right-handed alpha
Helix 13
13
A
294 313Right-handed alpha
Helix 14
14
A
314 319Right-handed 310
Helix 15
15
A
320 332Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 2H8O.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 136first strand
Strand 2
A
139 140anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il