Analysis of interatomic Contacts of Structural Units in PDB entry:
2HAE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2HAE entry

There are 4 chains in PDB entry 2HAE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 2	ALA 376
B	ASP 2	ALA 376
C	ASP 2	ALA 376
D	ASP 2	ALA 376

There are 76 helices in PDB entry 2HAE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	2	11	Right-handed alpha
Helix 2	2	A	24	32	Right-handed alpha
Helix 3	3	A	36	46	Right-handed alpha
Helix 4	4	A	49	54	Right-handed alpha
Helix 5	5	A	55	57	Right-handed 310
Helix 6	6	A	76	96	Right-handed alpha
Helix 7	7	A	108	117	Right-handed alpha
Helix 8	8	A	118	120	Right-handed 310
Helix 9	9	A	134	147	Right-handed alpha
Helix 10	10	A	154	175	Right-handed alpha
Helix 11	11	A	177	180	Right-handed 310
Helix 12	12	A	189	203	Right-handed alpha
Helix 13	13	A	244	249	Right-handed alpha
Helix 14	14	A	265	272	Right-handed 310
Helix 15	15	A	289	297	Right-handed alpha
Helix 16	16	A	313	316	Right-handed 310
Helix 17	17	A	317	328	Right-handed alpha
Helix 18	18	A	333	346	Right-handed alpha
Helix 19	19	A	361	375	Right-handed alpha
Helix 20	20	B	2	11	Right-handed alpha
Helix 21	21	B	27	32	Right-handed alpha
Helix 22	22	B	34	46	Right-handed alpha
Helix 23	23	B	49	54	Right-handed alpha
Helix 24	24	B	55	57	Right-handed 310
Helix 25	25	B	76	96	Right-handed alpha
Helix 26	26	B	108	118	Right-handed alpha
Helix 27	27	B	134	147	Right-handed alpha
Helix 28	28	B	154	175	Right-handed alpha
Helix 29	29	B	177	180	Right-handed 310
Helix 30	30	B	189	203	Right-handed alpha
Helix 31	31	B	244	249	Right-handed alpha
Helix 32	32	B	265	272	Right-handed 310
Helix 33	33	B	289	297	Right-handed alpha
Helix 34	34	B	313	316	Right-handed 310
Helix 35	35	B	317	328	Right-handed alpha
Helix 36	36	B	333	346	Right-handed alpha
Helix 37	37	B	361	375	Right-handed alpha
Helix 38	38	C	2	11	Right-handed alpha
Helix 39	39	C	26	31	Right-handed alpha
Helix 40	40	C	35	46	Right-handed alpha
Helix 41	41	C	49	54	Right-handed alpha
Helix 42	42	C	55	57	Right-handed 310
Helix 43	43	C	76	96	Right-handed alpha
Helix 44	44	C	108	117	Right-handed alpha
Helix 45	45	C	118	123	Right-handed 310
Helix 46	46	C	134	147	Right-handed alpha
Helix 47	47	C	154	175	Right-handed alpha
Helix 48	48	C	177	180	Right-handed 310
Helix 49	49	C	189	203	Right-handed alpha
Helix 50	50	C	244	249	Right-handed alpha
Helix 51	51	C	267	272	Right-handed 310
Helix 52	52	C	289	297	Right-handed alpha
Helix 53	53	C	313	316	Right-handed 310
Helix 54	54	C	317	328	Right-handed alpha
Helix 55	55	C	333	346	Right-handed alpha
Helix 56	56	C	361	375	Right-handed alpha
Helix 57	57	D	2	11	Right-handed alpha
Helix 58	58	D	24	32	Right-handed alpha
Helix 59	59	D	36	46	Right-handed alpha
Helix 60	60	D	49	54	Right-handed alpha
Helix 61	61	D	55	57	Right-handed 310
Helix 62	62	D	76	96	Right-handed alpha
Helix 63	63	D	108	117	Right-handed alpha
Helix 64	64	D	118	123	Right-handed 310
Helix 65	65	D	134	147	Right-handed alpha
Helix 66	66	D	154	175	Right-handed alpha
Helix 67	67	D	177	180	Right-handed 310
Helix 68	68	D	189	203	Right-handed alpha
Helix 69	69	D	231	236	Right-handed alpha
Helix 70	70	D	244	249	Right-handed alpha
Helix 71	71	D	265	272	Right-handed 310
Helix 72	72	D	289	296	Right-handed alpha
Helix 73	73	D	313	316	Right-handed 310
Helix 74	74	D	317	328	Right-handed alpha
Helix 75	75	D	333	346	Right-handed alpha
Helix 76	76	D	361	375	Right-handed alpha

There are 9 sheets in PDB entry 2HAE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	98	103	first strand
Strand 2	A	59	64	parallel
Strand 3	A	126	128	parallel
Strand 4	A	151	153	parallel

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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	214	215	first strand
Strand 2	A	206	211	anti-parallel
Strand 3	A	182	186	parallel
Strand 4	A	254	257	parallel
Strand 5	A	277	280	parallel
Strand 6	A	300	303	parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	15	17	first strand
Strand 2	D	15	17	anti-parallel

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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	103	first strand
Strand 2	B	59	64	parallel
Strand 3	B	125	128	parallel
Strand 4	B	151	153	parallel

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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	214	215	first strand
Strand 2	B	206	211	anti-parallel
Strand 3	B	182	186	parallel
Strand 4	B	254	257	parallel
Strand 5	B	277	280	parallel
Strand 6	B	300	303	parallel

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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	98	103	first strand
Strand 2	C	59	64	parallel
Strand 3	C	125	128	parallel
Strand 4	C	151	153	parallel

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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	214	215	first strand
Strand 2	C	206	211	anti-parallel
Strand 3	C	182	186	parallel
Strand 4	C	254	257	parallel
Strand 5	C	277	280	parallel
Strand 6	C	300	303	parallel

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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	98	103	first strand
Strand 2	D	59	64	parallel
Strand 3	D	125	128	parallel
Strand 4	D	151	153	parallel

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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	214	215	first strand
Strand 2	D	206	211	anti-parallel
Strand 3	D	182	186	parallel
Strand 4	D	254	257	parallel
Strand 5	D	277	280	parallel
Strand 6	D	300	303	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2HAE

Analysis of interatomic Contacts of Structural Units in PDB entry:
2HAE