Analysis of interatomic Contacts of Structural Units in PDB entry:
2HAG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2HAG entry

There is 1 chain in PDB entry 2HAG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 5ASN 311
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 2HAG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
32 54Right-handed alpha
Helix 2
2
A
55 58Right-handed 310
Helix 3
3
A
69 74Right-handed alpha
Helix 4
4
A
110 126Right-handed alpha
Helix 5
5
A
159 166Right-handed alpha
Helix 6
6
A
171 175Right-handed 310
Helix 7
7
A
188 193Right-handed alpha
Helix 8
8
A
196 205Right-handed alpha
Helix 9
9
A
223 229Right-handed alpha
Helix 10
10
A
264 276Right-handed alpha
Helix 11
11
A
284 288Right-handed 310
Helix 12
12
A
302 308Right-handed alpha
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There are 3 sheets in PDB entry 2HAG. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
241 242first strand
Strand 2
A
252 261anti-parallel
Strand 3
A
245 249anti-parallel
Strand 4
A
129 138anti-parallel
Strand 5
A
20 28anti-parallel
Strand 6
A
102 108anti-parallel
Strand 7
A
60 66anti-parallel
Strand 8
A
290 300anti-parallel
Strand 9
A
178 187anti-parallel
Strand 10
A
252 261anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 90first strand
Strand 2
A
93 95anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
230 231first strand
Strand 2
A
237 238anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il